Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00079 ATGTCGTGCGAGGATGTGTTCATTGGCGCCATCGACCAAGGTACGACCAGCAGCAGGTTCATAATCTACGACGGGTCGAGTAAAGCCATCGGAATCCACCACGTGGAGTTCACGCAGTTCTACCCGCAACCCGGGTGGGTGGAGCATGACCCGATGGAGATCTTGGAGAGCGTGAAGGTGTGCGTGGCCAAAGCAGTCGACAAGGCCACCGCCGATGGCTTCAACGTCGACAAGGGACTCAAGGCCATCGGTCTCACCAATCAGAGAGAAACCGCTCTCGTCTGGAGCAAATCCACCGGTCTCCCTTTCTACAACGCCATCGTTTGGATGGATGGTCGTACTTCTTCCATTTGCAGGAGACTGGAAAAAGAGTTATCCGGCGGTAGAACCCATTTTGTGGAGAAGTGTGGCTTGCCTATTAGCACATACTTTAGTGCAGTGAAATTACTGTGGCTGATAGAAAATGTGAGTGCCGTGAAGGAGGCTATAGAGAAAAAGGATGCGCTGTTTGGAACTATAGATACTTGGTTGATATGGAATTTAACTGGTGGGGTAAAGGGGGGATTGCATGTTACTGATGTTTCTAACGCATCTCGTACAATGTTCATGAATCTAAGAACCCTGCAGTGGGACGAAACTATATTGGAAACTCTTAAAATTCCTGCTGAAATTTTGCCTAAAATTGTTAGTAATTCTGAAGTTATAGGAGATATTGCGGCTGGATGGCCAATTACTGGTATCCCTATTGCTGGATGTTTAGGGGATCAGCATGCTGCCATGTTAGGACAATCATGCCGTAAGGGGGAGGCTAAAAGCACTTATGGCACAGGTGCTTTTATATTACTGAATACTGGTGAAGGGATAGTTAAATCAAAACACGGTCTTCTAACCACATTAGCCTACAAGCTTGGCCCAAATGCTCCAACCAATTATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTGCAATGGCTTAGAGACGGTCTTGGCCTCATTTCCTCTGCTTCGGAGATAGAGGAGCTGGCATCACAGGTTGATTCCACTGGTGGGATTTACTTTGTTCCTGCTTTTAGTGGATTGTTTGCTCCATGGTGGCGTGATGATGCTCGTGGTGTTATTGTTGGAATGACAAGGATCACAAACAAAGCCCACATTGCTCGAGCCGTGCTTGAGAGCATGTGTTTCCAAGTGAAAGATGTCTTGGATTCAATGCACAAAGATTCAACACAAGATTCCAAAGAGGAATCCTTGCTTAGAGTGGATGGTGGTGCAACTGTTAACAACCTCTTGATGCAGACTCAGGCAGATTTGTTGGGAAGTTCAGTAGTTAGACCTGTTGACATAGAGACCACAGCACTTGGAGCAGCCTATGCTGCAGGGTTGGCTATTGGGGTTTGGAAAGAAGATCATATTTTCAATTCCCAGGAAAAGATGAAGAATGCTAAAGTTTTCCGTCCCATAATGTCTGAGGAAGTAAGGAAAAAGAAATTTGAATCTTGGTGCAAAGCTGTTAGTAAAACTTTTGACTTAGCTGATCTTGCTCTTTGA 1554 0.4595 MSCEDVFIGAIDQGTTSSRFIIYDGSSKAIGIHHVEFTQFYPQPGWVEHDPMEILESVKVCVAKAVDKATADGFNVDKGLKAIGLTNQRETALVWSKSTGLPFYNAIVWMDGRTSSICRRLEKELSGGRTHFVEKCGLPISTYFSAVKLLWLIENVSAVKEAIEKKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMFMNLRTLQWDETILETLKIPAEILPKIVSNSEVIGDIAAGWPITGIPIAGCLGDQHAAMLGQSCRKGEAKSTYGTGAFILLNTGEGIVKSKHGLLTTLAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLISSASEIEELASQVDSTGGIYFVPAFSGLFAPWWRDDARGVIVGMTRITNKAHIARAVLESMCFQVKDVLDSMHKDSTQDSKEESLLRVDGGATVNNLLMQTQADLLGSSVVRPVDIETTALGAAYAAGLAIGVWKEDHIFNSQEKMKNAKVFRPIMSEEVRKKKFESWCKAVSKTFDLADLAL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00079 517 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 464 IPR018485 GO:0005975|GO:0016301
Vian9g00079 517 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Vian9g00079 517 SUPERFAMILY Actin-like ATPase domain 266 510 IPR043129 -
Vian9g00079 517 PANTHER SUGAR KINASE 7 511 - -
Vian9g00079 517 Gene3D - 264 512 - -
Vian9g00079 517 FunFam Glycerol kinase 264 512 - -
Vian9g00079 517 FunFam Glycerol kinase 5 263 - -
Vian9g00079 517 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 373 393 IPR018483 GO:0005975|GO:0016773
Vian9g00079 517 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016301
Vian9g00079 517 NCBIfam glycerol kinase GlpK 7 510 IPR005999 GO:0004370|GO:0006072
Vian9g00079 517 PIRSF GlpK 5 516 IPR000577 GO:0005975|GO:0016301
Vian9g00079 517 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Vian9g00079 517 Gene3D - 3 262 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00079 K00864 - gmx:547750 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00079 9 655960 658199 Vian9g00079 9 655960 658199 ECH