Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00071 ATGTCTTCTCTAAGATCAACCATGTCAAATGGTCCTTCTAAATCAACCTTTGACGAGCATCGATGGGTGATTCACATCCGCAAAACCCTGGAAGAAGAGCTCGAGGAAGATGGTGAATTTGCTGTATCCATCTTCAGTGTGCCCAAGCTTCTCATGGCAAGTGATCCTGACTCGTACGTCCCCCAACAGGTTGCGATTGGTCCTTACCATTATTGGCGTCCCGAGCTATATGAGATGCAAAGGTACAAGATTGCAGCAGCAAAAAGATTCCAGAAACGACTACAAAGCTGCAACTTGGATACTCTGATTGATCAATTGACCAAGTTGGAGCAAAGGGTTCGATCATGCTACCACAAGTTCTTGGATTTCAACGGGGAAACACTGGTGTGGATGATGGCAGTTGATGCCTCGTTCTTGCTTGAGTTCCTTCAGGTTTATGCCATGCAGGAAGGAGCAAAGGTGCAAAGGGTTTCCAGCAGCATGTCGCATTTAGTGGACTATGCTGGGAAGAAATCAGCTCACAATGCGATTTTGAGAGACATTGTGATGCTTGAGAATCAAATCCCGTTATTTGTGTTGAGAAAGATGCTGGAGTTCAAATTCTCATCACTGGAAGCTGCTGATGACATGCTGAGGATGATGTTCATAGGGCTGTTCAAAGAGATTTCTCCGTTCAAAATGATGGAGGAGTATCCAAACATTCAGGTATCAGAGAGCGTGCATTTGCTAGATTTCTTGTACGATGTGATAGTGCCAAAATCAGAACAACAACCAGACACAATCGAAGCTGAGGTTCAACAAGAAGAAGAACAAAACCAAGGGAATGAAAATGAAGAAGGAAGCTCATCAGACTCCAGCCATGTTAAGCAATTCTTCAGTGAAATATGGAAGCTTCTTTCAAAGTTAAACAAAGGGCCAGTGAAGTTAATAAAGAAGGTAATAACTGTGTCAAAACCTCTCAAAGTCATTGTTCAGTTGCCTTGGAAAATCGTTTCCAACCTTCCAGGACTCAAGCTTCTGAAGCAACCTGTTGAATATTTCTTCTTCTCTCAAGAAAAAGGAGAAAATATGAGTTCAAGCTCCAAAACTCTCATGAACAAGCCACCCTCAGTGGAGGAAATCACCATTCCTTCTGTTACAGACCTCTTGAACTGTGGTGTTCGTTTTGTAGCTACTGCTGGAAGCATATCAAACATCAGTTTTGACTCCAAAACGCGAACTTTTTATCTTCCCACAATAGGTTTGGACGTTAACAGTGAAGTTTTCCTGAGAAACTTGGTTGCGTATGAAGCATCGGTTGCATCGGGGCCGTTGGTTATAACCCGTTACACTGAGCTGATGAACGGGATTATAGACTCGGAGGAAGATGCAAAGATTCTGAGAGAAAAAGGGATAATTATGAACCATTTGAAGAGTGATAAAGAGGTGGCTAACCTATGGAATGGAATGAGCAAGTCGTTGAGATTGTCGAGGGTGGCAGAATTGGACAAAGTGATTGAAGATGTTAACAAGTATTATAACTGTAGATTGAAGGTTAAAGTTGTGAAGTTCATGAAGGCTTATGTGTTTAGTTCTTGGCAGTTTTTGACATTCCTTGCTGCCATATGCCTCTTGCTCTTGATGGCTTTGCAAGCTTTCTGCTCTGTCTACACTTGCAGTCGTTTTTTCCAATCTGCACTAAATTCCAGTGATTAA 1695 0.423 MSSLRSTMSNGPSKSTFDEHRWVIHIRKTLEEELEEDGEFAVSIFSVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQRYKIAAAKRFQKRLQSCNLDTLIDQLTKLEQRVRSCYHKFLDFNGETLVWMMAVDASFLLEFLQVYAMQEGAKVQRVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPLFVLRKMLEFKFSSLEAADDMLRMMFIGLFKEISPFKMMEEYPNIQVSESVHLLDFLYDVIVPKSEQQPDTIEAEVQQEEEQNQGNENEEGSSSDSSHVKQFFSEIWKLLSKLNKGPVKLIKKVITVSKPLKVIVQLPWKIVSNLPGLKLLKQPVEYFFFSQEKGENMSSSSKTLMNKPPSVEEITIPSVTDLLNCGVRFVATAGSISNISFDSKTRTFYLPTIGLDVNSEVFLRNLVAYEASVASGPLVITRYTELMNGIIDSEEDAKILREKGIIMNHLKSDKEVANLWNGMSKSLRLSRVAELDKVIEDVNKYYNCRLKVKVVKFMKAYVFSSWQFLTFLAAICLLLLMALQAFCSVYTCSRFFQSALNSSD 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00071 564 Pfam Plant protein of unknown function 44 540 IPR004158 -
Vian9g00071 564 MobiDBLite consensus disorder prediction 258 285 - -
Vian9g00071 564 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 37 549 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00071 Vian-Chr9 571757 573451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00071 - - vun:114165667 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00071 9 571757 573451 Vian9g00071 9 571757 573451 ECH