Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00064 ATGGCCCTTCTTCTCCGTCTCAATCGTCGGAGGGCAACCAGCTCTCGCACCCTCTTCTTCTCTACTTCGAATTCCGATTCAAACTCCGACTCCAACTCTCCCTTCTCTTCCCTTTTCATAGATGTCAAGGAAAGTCTCAAACAACCCTCTTCACCTTCCTCAAACCCTCGCTCCCAACCACCCTTCGCAAACGAGATCCTAAAAGACCTCAGCGAGTTCCGCGCCAAGACCGCTCCACCTCCGCCGGGCGACCCGTCGCAGCAGCAACAGCAATTCTCGTTCCAGCAAATCTACCAGCGCCAGACCGTGCAGGGGAATCCCCCCAGATCGGGAGAATCGTCCTCCCCCAGCATGGAATCCATTTTCGGGAGCCTGCGGAACTTGTCTGTTGCTCAAACCCCGGTGTCGCAGGGTCGTCCTAGGATGATCGGCGGCACGAACGCCTTGCCGCAGGCCATTTTCGGGAAAGAGATGAGGAAAGTGGAAATTGAGGATGCTGAGGCCGGAGGGAAAGGAAAAGGGTTGGTTTTCGTACAGGGACTTAGCATATTGAACCATTTGAGTGGGACTCCAACCTTCTCTCTGGAACCTCCTAAACCCCATCTTGTTGAAAAGTACTTTCATCCGGATAACATGTCCTCCGCTGAGAAGATGAAAACTGAGCTTGCCAAGGTTAGGGATGAGTTTAAAATGTCGGAGTCGGACTGCGGTTCTGCGCGTGTTCAAAGATGTCATTCTCGTAAAGGATTGGTAGCAATGGTTCAGATGAGAAAAAGATTACTGAAATACCTCAGAAGAACTGATTGGGATTCCTATTGCTTTGTTATCTCTAAGCTGGGTCTTCGTGATAATCCTGATCATAGCTACAGATCTCGAACTAGTATGAACCAAACTGCTCAAGTGGCTGAATCACTGGCTTTCAGGTCTGGTTTTTACAACTACAATCCTCACATCAATTACTGA 963 0.4995 MALLLRLNRRRATSSRTLFFSTSNSDSNSDSNSPFSSLFIDVKESLKQPSSPSSNPRSQPPFANEILKDLSEFRAKTAPPPPGDPSQQQQQFSFQQIYQRQTVQGNPPRSGESSSPSMESIFGSLRNLSVAQTPVSQGRPRMIGGTNALPQAIFGKEMRKVEIEDAEAGGKGKGLVFVQGLSILNHLSGTPTFSLEPPKPHLVEKYFHPDNMSSAEKMKTELAKVRDEFKMSESDCGSARVQRCHSRKGLVAMVQMRKRLLKYLRRTDWDSYCFVISKLGLRDNPDHSYRSRTSMNQTAQVAESLAFRSGFYNYNPHINY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00064 320 Gene3D - 243 285 - -
Vian9g00064 320 MobiDBLite consensus disorder prediction 43 62 - -
Vian9g00064 320 PANTHER S15/NS1, RNA-BINDING PROTEIN 245 288 - -
Vian9g00064 320 Pfam Ribosomal protein S15 245 282 IPR000589 GO:0003735|GO:0005840|GO:0006412
Vian9g00064 320 MobiDBLite consensus disorder prediction 43 61 - -
Vian9g00064 320 SMART Ribosomal_S15_2 222 282 IPR000589 GO:0003735|GO:0005840|GO:0006412
Vian9g00064 320 MobiDBLite consensus disorder prediction 100 120 - -
Vian9g00064 320 Coils Coil 215 235 - -
Vian9g00064 320 MobiDBLite consensus disorder prediction 74 93 - -
Vian9g00064 320 SUPERFAMILY S15/NS1 RNA-binding domain 222 283 IPR009068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00064 Vian-Chr9 496874 499536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00064 - - ccaj:109818150 203.756