Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00062 ATGACTGTGAAAGATTTTCCTGAAGAATGTTGGGAATCAGTATTCAGATTCCTTGGCCTTGGTCATCATCATTTGGAGTCTTTATCTCTGGTTTGCAAGCAGTTTCTTGCCATTACAAATAGGCTTCAATTCTCTCTCACAGTGTATGATCCAACCATTCCACTTCTTCCTCGGTTGTTGCTTAGATTTCCAAGGCTCAAAATCTTAGACCTGAGTCTCTTGAATGGCCACCATGAAGGCTTGCTTCGTCAAATTTCACAATCTGGGTTGGAGCTTGATTTGATTAATCTATCCAACCAGAGAACACTTCCTGTTGATGGCTTGCGAGAACTTGGCTCAAACATGAAAAATTTGAGGGTTCTGATCTGCTCAAACATTGGCTCTCTTCGTGATAGTCATCTGGTAATCATAGCTTATTGTTTCCCATTGCTTGAAAAGCTTGACATAAGCTTCCCATTGAATTCTCAAGCATCTGATTTTGGGGTTCTAAGGCTGTCTTCTATGCTTGAGAATCTTCGCAAGATTAATATCTCTGGTAATCATTTGATCACTGATAAATCATTGTTCTCTCTTTGCCAAAACTGTTTGTCATTGGAAGAGATTTCATTCTTCATCTGTTTTAAGATCACTCAAACAGGCATTGCCTCTGCGATCCGCCTCAGACCCGGTTTGAGCTCCATTGCCTTTAACATTGAAAAGAAAAGAATACATGGACCTGGTTTAACACTCACCCCCATTGACTTCAATTTGATCGATTCATTCAGGACTTTGAAAAGGTTAACTGCTATTGATTTGTCGAATTCTGTTATCTCGGATGAGTTTCTCTTTGCGGTTGCAGAAGGTGCAGGTCTTCTGCTAAAGAAGCTTATCCTCCAAGACTGTTGCAATTGTACATTTTCAGGAATCTCTTATGTGTTATCCAAATGCCAATCTGTTCAATGCTTGGATCTTCGGAAAGTTGATTTCTTAACTGATCAATGTATCAGCAAGTTATCTGTATTTCTTCTTAGCCTAACCACTATAAACCTCAGTGGTTGTTGCCAGCTGACAAATTCAACATTTTTCATTCTCACAAGAAACTGTCCTTTGCTCAGTGAGATCAAAATGGAAAGGACATATCTTGGGGTGGAAGGGGAAGAAGATTCAATGAGGGATTTTGCTGTCAACCTTGAAGTGAAAAAGGTGTTTTTGGGTGATAATGTTTTGCTGAGTGATGCAAGTTTGGTAAAATTCGTTTCCATTTGCCCCAGTTTGCAGCTTCTTGACTTAATCGGTTGTGAGGGTGTTTCTGGTGAAGGTGTTGTTGAGGTTTTGAAGAGATGCAGTGAGATAAGGCATTTGAACCTGGCTAATACAGGTATGGAAGTGTTTGATATAGACTTTGAAGTTTCGAACCTGAAGGTGTTGAACTTGTCAGGGTCAAAAATTGAGGATGAAACTCTCTCAGTAATTTCAAGAAGGTGTGGTGGACTACTACTTCTGGACATTCAGAGTTGCTGGCATGTTACAGCAAAGGGTGTTAGAGAAGTAGTACAAAACTGCAAGACATTGAAGGAGTTGAATCTGAAGAATTGTAGGTTGGTGAGTGATGATTTTGTTGCTTGGTTGGAGTTTTCAAAACCATCATTGAGAATAATAGTCACACCTACTGATGTTGGTGCTTATTTCTGA 1671 0.3974 MTVKDFPEECWESVFRFLGLGHHHLESLSLVCKQFLAITNRLQFSLTVYDPTIPLLPRLLLRFPRLKILDLSLLNGHHEGLLRQISQSGLELDLINLSNQRTLPVDGLRELGSNMKNLRVLICSNIGSLRDSHLVIIAYCFPLLEKLDISFPLNSQASDFGVLRLSSMLENLRKINISGNHLITDKSLFSLCQNCLSLEEISFFICFKITQTGIASAIRLRPGLSSIAFNIEKKRIHGPGLTLTPIDFNLIDSFRTLKRLTAIDLSNSVISDEFLFAVAEGAGLLLKKLILQDCCNCTFSGISYVLSKCQSVQCLDLRKVDFLTDQCISKLSVFLLSLTTINLSGCCQLTNSTFFILTRNCPLLSEIKMERTYLGVEGEEDSMRDFAVNLEVKKVFLGDNVLLSDASLVKFVSICPSLQLLDLIGCEGVSGEGVVEVLKRCSEIRHLNLANTGMEVFDIDFEVSNLKVLNLSGSKIEDETLSVISRRCGGLLLLDIQSCWHVTAKGVREVVQNCKTLKELNLKNCRLVSDDFVAWLEFSKPSLRIIVTPTDVGAYF 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00062 556 Gene3D Ribonuclease Inhibitor 381 454 IPR032675 -
Vian9g00062 556 Gene3D Ribonuclease Inhibitor 455 548 IPR032675 -
Vian9g00062 556 Gene3D Ribonuclease Inhibitor 1 238 IPR032675 -
Vian9g00062 556 Gene3D Ribonuclease Inhibitor 239 377 IPR032675 -
Vian9g00062 556 FunFam F-box/LRR-repeat protein 20 461 548 - -
Vian9g00062 556 SMART LRR_CC_2 514 541 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 415 440 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 335 360 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 488 513 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 195 220 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 169 194 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 257 281 IPR006553 -
Vian9g00062 556 SMART LRR_CC_2 463 487 IPR006553 -
Vian9g00062 556 SUPERFAMILY RNI-like 293 546 - -
Vian9g00062 556 SUPERFAMILY RNI-like 53 376 - -
Vian9g00062 556 PANTHER UNCHARACTERIZED 304 532 - -
Vian9g00062 556 FunFam F-box/LRR-repeat protein 4 240 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00062 Vian-Chr9 486562 488232 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00062 K10268 - gmx:100811565 914.835