Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00057 ATGCTGTGCAGGAAGAGCTCCAAAAACGGTGTCGCTTCGGGATCGGTCCCGGTGTACCTCAACGTCTACGATCTGACACCGATGAACGGTTACGCTTACTGGTTCGGCCTCGGAGTTTACCATTCCGGCGTGCAAGTTCACGGCGTTGAATTCGCCTTCGGGGCTCACGAGTATCCGTCGACGGGGATATTCGAGGGGGAACCAAGGAGGTGCGAAGGTTTCACTTTCAGAAAAACGATTCTTATCGGAAAAACCGACATGGGACCCGGCGAGGTGAAGACGGTTATGGAAGAACTCGCCTCTGAATACAGAGGAAACGCTTACAATCTCATCACCAAAAATTGCAACCATTTCTGCAACGCTGCGTGTCTAAGACTCACCGGAAATCCGATTCCAAGTTGGGTCAATCGTCTTGCCAGAATCGGTTTTTTGTGCAACTGTGTTCTTCCTGTGACACTGAACTCAACAAAAGTTAGGCATCACAGAATGGAAGAGAAGCCATGCGAGGGAGAGAAGGAAGCTTTGGCGAGTGAGGGAAAGAAACCAACTTCAACACCATCCCCTGCGAGAGGGCGCAGGGGAAGGAGTAGAACCCGACGCCCACTCCCTCCTCCTTCACCGTTGATTGTTGGGTCTTCTTCGTGA 645 0.5178 MLCRKSSKNGVASGSVPVYLNVYDLTPMNGYAYWFGLGVYHSGVQVHGVEFAFGAHEYPSTGIFEGEPRRCEGFTFRKTILIGKTDMGPGEVKTVMEELASEYRGNAYNLITKNCNHFCNAACLRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRMEEKPCEGEKEALASEGKKPTSTPSPARGRRGRSRTRRPLPPPSPLIVGSSS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00057 214 MobiDBLite consensus disorder prediction 162 214 - -
Vian9g00057 214 Gene3D PPPDE domains 12 168 IPR042266 -
Vian9g00057 214 MobiDBLite consensus disorder prediction 162 178 - -
Vian9g00057 214 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Vian9g00057 214 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Vian9g00057 214 PANTHER DESUMOYLATING ISOPEPTIDASE 15 180 IPR008580 GO:0008233
Vian9g00057 214 SMART DUF862_2a 16 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00057 Vian-Chr9 455242 456463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00057 K22763 - gmx:100796813 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00057 9 455242 456463 Vian9g00057 9 455242 456463 ECH