Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00051 ATGGACTACAGCTCCGAAGATGATTCAGATCTAAGTGAATCTGAGATTTATGACTACTCAGACAAACCTTATGAACTGTTAAGGGCTGGAAAATATAAGGTTAAAAACTTGAATGGAACTCTTAGATGCCCTTACTGTGCTGGGAAGAAAAAACAAGACTACAAATATAAGGATTTATTGCAACATGCATCTGGTGTTGGTAAGGGTTCTGCTAACAGAAGTGCAAAACAAAAGGCAAACCACCTTGCTCTAGCAAAGTATTTGGAGATTGATCTAGCTAGTGAAGCAGAGCCAATCCAGAACCCAGCTTTACCCCCAGTTGTTAGTCAACCTTCACAGTTAGAATATCTTTATTATGTTTGGCCCTGGACTGGCATAATTGTTAACATAAAGGGTAAATTGATTGATTCTACACACTGGTTGAAGGAATTTGCTAAATTCAGACCAACTGATTCCCATATATTTATGAAAGATAGTGACATGGCTGCTCAAGCTGTAGTAGTGTTCAATAGTGACTGGAATGGTTTCATAAATGCAACTGAATTTGAGAAGTCTTTTGAAACTGCACGTCATGGTAAAAAGGACTGGAGCTCAAACAAGTTAGAAGCTGACTCAAATATTTATGGATGGGTCGCGCGGGAAGATGATTATAATTGTGGAGGGCCAATAGGGGAATACCTCCGCAGCAAAGGAACATTGAGGACAGTTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAATATTGTGACAAACCTCACGAAAGAAATCGAGATAACAAATGACAACCTTGACGAAATGCAGTCTAAGTTTAATGTGAAGACTATGTCCTTGAGTAGAATGCTTGAGGAGAAAGATAAGCTTCACAATGTTTTTGAAGAAGAAACAAGGAGTATGCAGCGTAGAGCACGTAATGAGGTACGGCGGATCTTGGATGAGCAAGAAAAATTGAGTAGTGAATTGGATGAGAAAAGGCGGAAGCTTGATTCTTGGAGCAGAGATCTAAACAAGCGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTTGCAGACGACAAGAAGAAGAAAGATTTGAGGAATGAATCACTCCTGTTGGCTTCAAAAGAACAGAAGATAGCGGACGAAAATGTCTTAAGACTTGTTGAAGAGCAGAAGAGAGAGAAAGAGGAGGCCTATAACAAGATACTTCAGCTGGAAAAACAGCTTGATGCCAAACAGAAATTGGAAATGGAAATTGAAGAGCTAAAAGGGAAATTGCAAGTTATGAAGCATCTTGGAGATGAAGATGATACAGCTGTTCAGAAAAAGATAGAAGAAATGAATGAGGAATTGCAAGAAAAAATAGAGAATTTGGAATCTGTGGAGAGCATGAATCAAACCCTCATTGTGAAGGAACGTCAGAGTAATGATGAACTGCAGGAAGCTCGCAAAGAATTAATAAAAGGGTTAGAGGATATGCTTAATGGTTCTAAAGGTAATATTGGGCTCAAGAGAATGGGAGAGCTTGATCAGAAGGTTTTTGTGACTAAATGCAAGGAAAGATTTTCTCCTCAAGAAGCTGGGATCAAAGGTGTCGAGCTTTGCTCTTTGTGGCAGGAAAACGTGAAGAATTCTGCTTGGCATCCATTTAAAGTGATCATGACTGATGATAATAAACATGAGAAAATTATAAATGAAAATGATGACAAGTTACGAAGCCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTTGTAACAGCCCTGACAGAAATAAACGAATACAATGCAAGTGGTGGATATACTGTTGCAGAGCTATGGAACATCAAGGAAAAAAGAAAGGCTACATTGAAAGAAGTTATCACTTATATTGTGGAACGTATCAAGCCAGCAGCTAAGCGCAAGAGAGGATAG 1899 0.3902 MDYSSEDDSDLSESEIYDYSDKPYELLRAGKYKVKNLNGTLRCPYCAGKKKQDYKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLEIDLASEAEPIQNPALPPVVSQPSQLEYLYYVWPWTGIIVNIKGKLIDSTHWLKEFAKFRPTDSHIFMKDSDMAAQAVVVFNSDWNGFINATEFEKSFETARHGKKDWSSNKLEADSNIYGWVAREDDYNCGGPIGEYLRSKGTLRTVSDIVQEASESRNNIVTNLTKEIEITNDNLDEMQSKFNVKTMSLSRMLEEKDKLHNVFEEETRSMQRRARNEVRRILDEQEKLSSELDEKRRKLDSWSRDLNKREVLTDQERQKLADDKKKKDLRNESLLLASKEQKIADENVLRLVEEQKREKEEAYNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDTAVQKKIEEMNEELQEKIENLESVESMNQTLIVKERQSNDELQEARKELIKGLEDMLNGSKGNIGLKRMGELDQKVFVTKCKERFSPQEAGIKGVELCSLWQENVKNSAWHPFKVIMTDDNKHEKIINENDDKLRSLKQEWGDEIYSAVVTALTEINEYNASGGYTVAELWNIKEKRKATLKEVITYIVERIKPAAKRKRG 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00051 632 Coils Coil 301 335 - -
Vian9g00051 632 PANTHER RIBONUCLEASE P SUBUNIT P38 3 631 IPR045177 GO:0080188
Vian9g00051 632 Coils Coil 379 426 - -
Vian9g00051 632 Pfam XS domain 119 218 IPR005380 GO:0031047
Vian9g00051 632 Coils Coil 251 271 - -
Vian9g00051 632 Pfam XH domain 498 626 IPR005379 -
Vian9g00051 632 Gene3D XS domain 117 273 IPR038588 -
Vian9g00051 632 Coils Coil 431 479 - -
Vian9g00051 632 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00051 Vian-Chr9 417600 421721 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00051 - - pvu:PHAVU_010G160300g 1095.88