Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00049 ATGTGCAAACATTCTGACCTGAAAATGGCCTCTCCTGAAGAGACTGAGAGGAGTGTGGCAAAAAAACTTAGACATTTGGGGAGGAAGCTCCTCAAGGGCTCTTCACTTCACAAGCTTCTGCAGCTGCTTCATAAACTGGAGCTTGTATTATCAACCCTGGATCAAGAACCAACTAAGCTAATTCAAGAATCACTTGTACCTTGCATGAAGGCATTGATTTCAGATGAACTTTTGAGGCACGCAGATGAGGATGTTAAAATTCTAGTTATATCTTGCATCTCTGAGATTGCAAGAATCACAGCGCCAGATGCCCCTTATGACGATGAACAAATGAAGGAAATCTTCAAGCTCACTGTGGCATCTTTTGAGAAGTTATCTCACATATCTGGCTGTGCCTATGAAAAAGTGCTTATCATACTTGAAAATGTCAATAAGGTCAGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGGTTATTGAAATGTTTCAGCATTTCTTGAGATTTATAAGGTCAAACCATCCCTGTAGTGCATTTCATTCAATGGAATCAATAATGACTATGATTTTACAAGAAAGTGAACAAATTTCCCCAGATCTTCTTAGACCACTGTTGGATAGTGTAGGAAATGAAAATCGGACTGTTTCACCTATGTCTGGGACATTGGGGGAGAAAGTAATCAGAAACTGTACTGCTAAGCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGCAGAGCGATAAATGAGTATGCACAGATAGTAACTGATATTTGCCAGAATGAATCTGAATCCCCTCAATGTGATGATTCAAATGGTTCTAAGAAGACAGTGGTTCAGGAAGCTGAGAACAAGCTTAATGTTCCTAATGATGCAAAGGAACAACCGCATGATGAAACCAAGGGTCATGAACCCAATGTTACTGGTAAAAGAGATGTCCAAATTTTGGATGATACAAAGTCAAACAGAAGGTCCATTCTGGATGGCGAAGTTACAAAAAAAACTGGTTCAAAAAGGAGATCATGTTCTGAAATTTCCAAGAACTCAAAAAAAGGGAGTGCAAAAACCAAGTTGGAAACTGAAAATTTAGAGTCTGTTCAGGAACCAAAATCAGAAACTCAGCTGAATACTGTGCCAAGGAAGAGGGGCCGTAAGCCTAATTCTCTGATGAATGCAGAAGAAGGCTATGATCACTCGTGGATTTGTCGGGAAACTGAAGTGGGAAGATCAACACTATCCAGAAAGTCATGCGATTCCAGGTTTCCTTTTCGATCTTCTGAAAAAGCTACTTCCAGAAAAGATAAGTTGCATCGAAAGCATAAAACTGTAAGTGAAACTCTAGTTCATAAGCCGAAAAGTGAGGACATAGCAAAAACTACGAAACTCAGAAGGACTCACAATATTAGCAATGATTTTCCCCCAAATGATACAAGTGAAGGTCGTGAAGCTTCAGCTTCTAAGCCTAAAGCTGATGATAATGCTGATGCTTCTCCTTCTACAAATAATAATATTTCTGATGGATGTCACAGCAAACGGGGTCGGAGAAGGAAATTAAATATCACGGGGAATCAAGGTGTTCATTCCAATTCTTTGTCAATGTTAAAAGACAACTCAAATCCTCCGCCTCAGAAGATTTCTTTGGATTCCCCAACAGTTAGGTTGGAAAAGGAATCTGAAGCAAGGAATATCTCTGAACAAAAACCCATTAGGAAAATCAAATTTTCCTTAAGGCTTGATGGAAAACTTGTCATGGGTCCAGAATCAGCTGCTAATGGGGAGCCTAACGATTCATGTGGAGAAGAGGGGAAACACAAGTCATCTATGAATGATGAGCCAGCAAGTATTAAAGAGGGCACATTCTCAACTCAAACAAATGTTAAGAAAAGGAGGAGGCTTGATGCTACTCCTAACGAGGGCCTCAACAAATTATCAGCCGTGAAGGATCTGACAGCAGAATCTGCAAGTAAAACACTAAATAGTGTCAAGGAAACCCCACAAGCAAGGCTGAGGAGAAGACACAGTGATGTGAGTGCTAAGGCATCTGAATGTCTTTACAAGGATAAATCATTGGTCGGTAAGAGAATAAAGGTCTGGTGGCCAAAAGATAAGACGTTTTATGAAGGTGTTATCGAATCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCTGATGGTGATGTTGAAGTGTTGAACCTCAAAAAACAGAAATGGACAGTAGTTGACGTTTCGTTAGACAAGGAAGGGCTTACACTTCAGAGGCTCGCAGAAGCATCAGACGTAGCAGAAAAAGACAAGGAAAAATCAGAACTGGTGTCAGCCAAAGCTACAACTATCAAATCTCAGTCCAGAAATGACTCTAAGAAGCCTAAAAACCAGAAGAGGAACAGCTGA 2406 0.4036 MCKHSDLKMASPEETERSVAKKLRHLGRKLLKGSSLHKLLQLLHKLELVLSTLDQEPTKLIQESLVPCMKALISDELLRHADEDVKILVISCISEIARITAPDAPYDDEQMKEIFKLTVASFEKLSHISGCAYEKVLIILENVNKVRLCLVMLDLECNDLVIEMFQHFLRFIRSNHPCSAFHSMESIMTMILQESEQISPDLLRPLLDSVGNENRTVSPMSGTLGEKVIRNCTAKLKPYLMKAVESSGRAINEYAQIVTDICQNESESPQCDDSNGSKKTVVQEAENKLNVPNDAKEQPHDETKGHEPNVTGKRDVQILDDTKSNRRSILDGEVTKKTGSKRRSCSEISKNSKKGSAKTKLETENLESVQEPKSETQLNTVPRKRGRKPNSLMNAEEGYDHSWICRETEVGRSTLSRKSCDSRFPFRSSEKATSRKDKLHRKHKTVSETLVHKPKSEDIAKTTKLRRTHNISNDFPPNDTSEGREASASKPKADDNADASPSTNNNISDGCHSKRGRRRKLNITGNQGVHSNSLSMLKDNSNPPPQKISLDSPTVRLEKESEARNISEQKPIRKIKFSLRLDGKLVMGPESAANGEPNDSCGEEGKHKSSMNDEPASIKEGTFSTQTNVKKRRRLDATPNEGLNKLSAVKDLTAESASKTLNSVKETPQARLRRRHSDVSAKASECLYKDKSLVGKRIKVWWPKDKTFYEGVIESYDPIKGKHKILYADGDVEVLNLKKQKWTVVDVSLDKEGLTLQRLAEASDVAEKDKEKSELVSAKATTIKSQSRNDSKKPKNQKRNS 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00049 801 MobiDBLite consensus disorder prediction 496 510 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 469 484 - -
Vian9g00049 801 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 283 793 IPR039776 GO:0007064
Vian9g00049 801 MobiDBLite consensus disorder prediction 600 614 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 265 394 - -
Vian9g00049 801 FunFam Binding protein 689 741 - -
Vian9g00049 801 SUPERFAMILY Tudor/PWWP/MBT 692 732 - -
Vian9g00049 801 Coils Coil 36 56 - -
Vian9g00049 801 Pfam Sister chromatid cohesion protein PDS5 protein 38 240 - -
Vian9g00049 801 Gene3D - 683 741 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 414 566 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 524 549 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 290 369 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 769 801 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 449 468 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 265 287 - -
Vian9g00049 801 SUPERFAMILY ARM repeat 30 245 IPR016024 -
Vian9g00049 801 MobiDBLite consensus disorder prediction 786 801 - -
Vian9g00049 801 MobiDBLite consensus disorder prediction 588 621 - -
Vian9g00049 801 CDD Tudor_Agenet_AtEML-like 694 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00049 Vian-Chr9 401489 409810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00049 - - vra:106773633 1433.7