Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00043 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCGCGGTCGCCGACCCCGACGCGCGTCCAGTGCTCGTCCCGGCAGGCAACAAAGTCCGCCCCGCAGTCGACGGACGCAAGCCGGTGAAGAAATTGACGCCGGAGACAGAGAAGAAGCCGGTGGCGCTTTCAAATGCGCCACCGCAATGCATCTCCGCTCCTCCACCGTTTATTTTGCGGCGGCAGGAGCGTCACCAGGCCGTGCTGAAAAACCTGTCTTCGATGAGCGCTTCGTACTCCTCCGATGCGTCATCGACGGATTCCTCCACTCACAGTAGCGGCGCGTCGTCAAGCGGGAAGGTGGCTCGTCGGGTTAGTGTGCAGTTGAGGAAGAAGCAGTGTGGTCCCAAGACGGAGAAGGTGAGTAGTGACAATGTGGGTGGTTCTGAATATGTCGATTTGAGTGATAGCTTGGAGGGCAAGAAACGGTGTGCTTGGGTTACACCAAATACAGAGTCATGCTATGTTGCTTTTCATGACAACGAGTGGGGAGTTCCTGTTCATGACGACAGGAAACTGTTTGAGTTGCTTAGCTTTTCTGGAGCCTTGGCTGAGCTTACGTGGCCTACTATTCTTAACAAAAGGCAGCTATTTCGGGAAGTCTTTTTGGATTTTGATCCTAATGCTGTTTCTAGAATGAATGAGAAAAAGATAGCTGCACCAGGAAGTCCTGCCAACTCATTGTTATCAGAACTCAGGTTGCGATCAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATTGAAGAGTTTGGATCTTTTGACACATTTATTTGGAACTTTGTTAACCACAAGCCTATAGTTAGCCAATTCAGGTACCCACGCCAGGTACCTGTGAAATCTCCAAAAGCTGAAGTCATAAGTAAAGACCTTGTAAAGAGAGGTTTCAGGAGTGTTGGACCAACAGTCATCTACACTTTCATGCAAGTGGCTGGCCTAACAAATGACCATCTTATCAGTTGCTTCAGATTCAAGGAGTGTACCTCCAATGCAGAAGCCATGGCCAACGAAAGCTCCCTCAACTCCAAGCTCAAAGACAAGCCAAACGACGAGACAACTGATGTAGGCCTGTTACTGGCTGTGAACAAAATGAACTTCTCCTCTAAGTAG 1143 0.4943 MSGPPRVRSMNVAVADPDARPVLVPAGNKVRPAVDGRKPVKKLTPETEKKPVALSNAPPQCISAPPPFILRRQERHQAVLKNLSSMSASYSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKTEKVSSDNVGGSEYVDLSDSLEGKKRCAWVTPNTESCYVAFHDNEWGVPVHDDRKLFELLSFSGALAELTWPTILNKRQLFREVFLDFDPNAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNHKPIVSQFRYPRQVPVKSPKAEVISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAEAMANESSLNSKLKDKPNDETTDVGLLLAVNKMNFSSK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00043 380 MobiDBLite consensus disorder prediction 22 61 - -
Vian9g00043 380 MobiDBLite consensus disorder prediction 89 137 - -
Vian9g00043 380 Pfam Methyladenine glycosylase 161 334 IPR005019 GO:0006284|GO:0008725
Vian9g00043 380 Gene3D Hypothetical protein; domain 2 152 335 - -
Vian9g00043 380 MobiDBLite consensus disorder prediction 89 114 - -
Vian9g00043 380 PANTHER OS04G0501200 PROTEIN 6 345 - -
Vian9g00043 380 SUPERFAMILY DNA-glycosylase 153 338 IPR011257 GO:0003824|GO:0006281
Vian9g00043 380 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00043 Vian-Chr9 356459 360715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00043 K01246 - gmx:100805836 610.527