Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00042 ATGGCTGCAACTTATTACAACCTGCAAAGTCCGAAAACTTTCCCAAATCTTCTTAGGAACCTACCTTCCATTCCTTCCAGTCATGTCTCACTGTTGGGTTCATTGGACTATCCGTTTCATTGTTCCACTAGAAGAGGGTACCATGTTGAGGCCAATGCTAAGAAGAAGAATCCTTGGTTAGACCCTTTTGATGATGGGGATGACCCTGAGATGGAGAGTGGTTCCTTGTTTGCAAACGGGTTGCAGGAGGAGGATCCTAGGCCACCAGATGACCCTGACAACCCTTATGGATTTTTGAAGTTCCCTTCTGGATATGCTGTGGAGGTAGCGTCCCTTGCATTGAAAGTGAGAGGGGATGTGAGGAGATGCTGTTGTGTGATACCTGGTGGGGTTTATGAGAATCTCTTGTTCTTTCCAGCAATTCAGCTGATAAAGAACAGGTATCCTGGTGTTCAGATTGATGTGGTGGCGACCGAGAGGGGGAAGCAGACCTATGAAATGAATAAGAATGTTAGGTGGGCAAATGTCTATGACCCTGAAGATGATTTTCCAGAGCCTGCTGAGTATGCTGATATGATTGGAGTTCTAAAGAATAGGTACTATGACATGGTCCTAAGCACCAAATTGGCAGGCCTCGGCCATGCAGCATTTTTGTTTATGACAACCGCCAGAGATAGAGTTAGCTACGTGTACCCAAATGTGAATGCTGCAGGAGCCGGATTACTTTTATCTGAAACATTTGTACCAGATAGTTTAAATCTCTCAGATGGAGGGTATCATATGTATCATCAGATGGTTGACTGGCTGGGAAAACCATTTCGAGACCTTCCACAACAAGTAGTGCCACCCCTCAGGGTGTCAATCTCAAGGAAGCTGAAGGAGGTTGTGGAGGCAAAATACGAAAAAGCAGGTGTGAAAAAAGGAAAGTATGTTGTAATTCACGGGATAAAATCAGATTCACAGGCATCTATGCAGTCTAGGGGTGATCCTGATAGCTTGCTACCCATTGAAGTGTGGGCTGAAATTGCTGACGTTATAAGGGATGTTACGCCACTTTTTGTCATTCCTCATGAAAAGGAAAGGGAAAATGTGGAGGAAAACTTCGATGAAGATGCTTCTATTGTCTTCATCGCCACCCCTGGACAGCTGGCTGCTCTTATTAATGACTCAGCTGGAGTGATAGCTACAAACACAGCTGCCATTCAACTTGCAAGTGCACGCGACAAACCTTGTATTGCACTATTTTGCTCTGAAGAGATGGGAAACAAGTTTGTTCCGCAGGCTGAAGAGAAGAAATGCACCATAATATCATCCAAGACAGGAAAGTTAATAGATATTGATGTTGAGGCCATAAAAACCGCAGTTCAAACATTCAATTTGGCTCCAGTTTTAGTATAG 1398 0.4421 MAATYYNLQSPKTFPNLLRNLPSIPSSHVSLLGSLDYPFHCSTRRGYHVEANAKKKNPWLDPFDDGDDPEMESGSLFANGLQEEDPRPPDDPDNPYGFLKFPSGYAVEVASLALKVRGDVRRCCCVIPGGVYENLLFFPAIQLIKNRYPGVQIDVVATERGKQTYEMNKNVRWANVYDPEDDFPEPAEYADMIGVLKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYVYPNVNAAGAGLLLSETFVPDSLNLSDGGYHMYHQMVDWLGKPFRDLPQQVVPPLRVSISRKLKEVVEAKYEKAGVKKGKYVVIHGIKSDSQASMQSRGDPDSLLPIEVWAEIADVIRDVTPLFVIPHEKERENVEENFDEDASIVFIATPGQLAALINDSAGVIATNTAAIQLASARDKPCIALFCSEEMGNKFVPQAEEKKCTIISSKTGKLIDIDVEAIKTAVQTFNLAPVLV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00042 465 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 10 464 IPR044983 GO:0009507|GO:0009773|GO:0010598
Vian9g00042 465 Gene3D Glycogen Phosphorylase B; 117 271 - -
Vian9g00042 465 MobiDBLite consensus disorder prediction 71 94 - -
Vian9g00042 465 Gene3D Glycogen Phosphorylase B; 295 460 - -
Vian9g00042 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 122 457 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00042 - - gmx:100803710 834.713