Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00021 ATGAAGAAGAAGACGGTGGCGCAGCCGAAGTCCGGCGACGGTGACACCGTGCATTCACCGCTTGTCACTTATGCTTCCATGATTTCTCTTCTCACGCTATGTCCTCCATTTGTCATTCTGCTGTGGTACACCATGACTGCTGCTGACGGATCTGTTTCTGAGACGTGGAATTATTTGAAGCAGAATGGGGTGCAGGGCTTCCTAGATATATGGCCTAGACCAACTGCTACGGCTTACAAAATCATTGTGGTCTATGGTGTATTTGAAGCAGCGCTTCAGCTCCTTCTGCCCGCCAAAACCGTTTACGGCCCTATTTCTCCAACTGGACATCAACCTGTCTACAAGGCAAACGGTGTGGCGGCGTATTTAGTCACCTTGATTACTTATATGGCCCTTTGGTGGTTTGGGATATTCAACCCAACAGTTGTTTATGATCATTTGGGAGAAATATATTCAGCACTCATCTTCGGGAGCTTGGTCTTCTGTATTTTGTTGTACATAAAAGGTCATTTGGCACCATCCTCAACAGATTCTGGCTCATCTGGAAACATAATCATTGATTTTTACTGGGGGATGGAACTCTATCCGCGCATTGGAAAATATTTTGACATAAAAGTTTTCACCAACTGCAGATTTGGAATGATGTCATGGGCAGTTCTTGCGTTGACCTACTGTATAAAACAGTATGAAGAAAATGGAAAAGTATCAGACTCAATGCTTGTAAATACTGCATTAATGCTAGTATATGTTACCAAGTTTTTCTGGTGGGAGGCTGGATATTGGAACACAATGGATATTGCACACGATCGAGCTGGATTTTATATTTGCTGGGGTTGCTTGGTGTGGGTTCCATCTGTGTATACATCTCCTGGAATGTACCTTGTCAACCATCCCCTAAATCTCGGCATTCAGCTAGCGATCTCAATTTTATTGGCTGGCATTCTTTGCATATTCATCAACTATGACTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAAAGCACCATCTGGGGAAAAGCTCCGTCAAAGATAGAGGCCTCGTATACCACTACTACTGGGGAAACTAAAAGAAGTCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATACTGGCAGCTTTCTTCTGGACAGTCCCAGCTCTTTTTAATCATTTTTTGCCTTACTTCTACGTGATCTTTCTTACCATCCTTCTCTTTGATCGAGCAAAACGAGATGATGATCGATGCAGATCCAATCTGTCCTTCTTGTGGATCATGACCATTGCAAATGAAGTTGAAATTTTTCATGGCATGCAGGTATGGCAAGTACTGGAAACTATATTGCGACAAGAGATGTCATCGTATGACAACGTTGTTGGTGGGAAATTGAAGCTGAAGGGGAAAGCGCTGGATGTGGCGGGTGGGGTGAAGAAGAAGAAAAAGAAGAACAAGAGAAACCAAGATCAACTTCTGCAAGTTGCCGAAGATGAAATTTCAGCAGGTGGAAGCGCAGAACAAGGTAAAGATTCTAATGAGGAGGATACAAATACGGAGAGGGAAATGAGCAGTGGGAAAGGGAAGGTTGCCCATTATGATGATCATCTTACTCCGGCAGAGAGGAGATACATTGAGCAGAGGGAGCAACTTGATGTTCACAGATTGGCCAAGATTTCTAATAAATCTCACCGTGATAGAATTCAAGATTTCAACCAGTATCTTGCAAACATGAGCGAGCATTATGATATTCCTAAAGTTGGTCCTGGATGA 1779 0.4311 MKKKTVAQPKSGDGDTVHSPLVTYASMISLLTLCPPFVILLWYTMTAADGSVSETWNYLKQNGVQGFLDIWPRPTATAYKIIVVYGVFEAALQLLLPAKTVYGPISPTGHQPVYKANGVAAYLVTLITYMALWWFGIFNPTVVYDHLGEIYSALIFGSLVFCILLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVSDSMLVNTALMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPLNLGIQLAISILLAGILCIFINYDCDRQRQEFRRTNGKSTIWGKAPSKIEASYTTTTGETKRSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSNLSFLWIMTIANEVEIFHGMQVWQVLETILRQEMSSYDNVVGGKLKLKGKALDVAGGVKKKKKKNKRNQDQLLQVAEDEISAGGSAEQGKDSNEEDTNTEREMSSGKGKVAHYDDHLTPAERRYIEQREQLDVHRLAKISNKSHRDRIQDFNQYLANMSEHYDIPKVGPG 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00021 592 ProSitePatterns Sterol reductase family signature 1. 182 197 IPR018083 GO:0016628
Vian9g00021 592 MobiDBLite consensus disorder prediction 511 538 - -
Vian9g00021 592 Coils Coil 481 501 - -
Vian9g00021 592 Gene3D - 211 426 - -
Vian9g00021 592 Pfam FAM32A 459 552 IPR013865 -
Vian9g00021 592 MobiDBLite consensus disorder prediction 500 538 - -
Vian9g00021 592 Pfam Ergosterol biosynthesis ERG4/ERG24 family 52 422 IPR001171 GO:0016020|GO:0016126|GO:0016628
Vian9g00021 592 PANTHER DELTA(14)-STEROL REDUCTASE 17 423 - -
Vian9g00021 592 FunFam Putative 7-dehydrocholesterol reductase 234 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00021 Vian-Chr9 226504 234490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00021 14 428 Miscellaneous Gene Families AT1G50430 81.446 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00021 K00213 - vvi:100256426 914.835