Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00016 ATGGAGTTTCTGAAAATGAAGAAGTTCAGAAAATCTCCGAAAGCGGATGGTGAAAAGAATTTGTCAGACAAGGCAGTGGCTGAGCCCGAGGAACCGAAGCTCAACGCTGACGGTCCTGATCAGTCTAAATCGGGAAATGCGGATTCTGCTGGTGAAGCCGAGGATGACGATGATTTTATTACAAATGAGGTTAAGAGAAGGTTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCGGAGGAAGGGGAGGATGAAGAGGAAGAGGGAGAGACAAGCTCAAATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGTGGTTTCGATGCTGTATTTGAAAAATACTGTGAAAGAATGCTATTATTTGATCGGATGAGCACTCAACAACTTAGAGAAGCTGGCAAAGGTTCACAGCATACTTCAACTCCATCTCCAAGATCTGCATCAAAAAAGTTGGCTTCTCCCCTTCGTTGTCTTTCCTTGAAAAAATTTGAAGAACCTGATGATGAGACTGAACATCTTCAACAGCCGGAGAATGATCCCTACCAGGATATTGAAACAGCATATGTAGGTCAAATTTGCTTGACTTGGGAGGCACTTCATTGTCAGTATTCTCATATGAGTCAGAAGATATCTTGGCAACATGATAATCCTACCTGTTACAACCACAGTGCACAAGAGTTTCAACAGTTCCAAGTTTTATTACAAAGGTTTATAGAAAATGAACCTTTTGAGCATGGCCGTAGAGCTGAAATATATGCTCGCACTAGGAACAAACTGCCTAAACTGCTTCAAGTTCCTAATATACGAGGCTCAGATCATGAATTAACTGATGATTCGGAGATAAGAGTTCTTGCTCCTGATCTGATCAGGATAATTGAAAGCTCTATCCTTACATTCCATCTTTTCCTGAAAAGGGACAAGAAAAAGTCTAGTGGTACAACCAACCTGTTTGGAAATCACAACCAGCTAGCAACTCCTCTACACCAGATTCAGTCAACTCTTGAAAAGAAAGTAGTGAAGCTGAAGGAACTGAGAAGAAAGAAAAAAGGTTGGAAGAAGAATTGTTGGCCACTAAAGCATGAGGACATTCAGCTTTTGCTTGGGCTTGTTGACGTGAAGATGGTATCAAGGGTTCTGAGAATGACGAGGATGAGCAGGGAACAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTGGATTTATCAAGTGGTAGGTTAGAGAGGGATCCATGCCCCATCTTGTTCCCTTGCTAG 1287 0.4204 MEFLKMKKFRKSPKADGEKNLSDKAVAEPEEPKLNADGPDQSKSGNADSAGEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGEDEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCERMLLFDRMSTQQLREAGKGSQHTSTPSPRSASKKLASPLRCLSLKKFEEPDDETEHLQQPENDPYQDIETAYVGQICLTWEALHCQYSHMSQKISWQHDNPTCYNHSAQEFQQFQVLLQRFIENEPFEHGRRAEIYARTRNKLPKLLQVPNIRGSDHELTDDSEIRVLAPDLIRIIESSILTFHLFLKRDKKKSSGTTNLFGNHNQLATPLHQIQSTLEKKVVKLKELRRKKKGWKKNCWPLKHEDIQLLLGLVDVKMVSRVLRMTRMSREQLFWCEEKMKKLDLSSGRLERDPCPILFPC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00016 428 MobiDBLite consensus disorder prediction 1 37 - -
Vian9g00016 428 MobiDBLite consensus disorder prediction 78 107 - -
Vian9g00016 428 PANTHER DNA LIGASE (DUF1666)-RELATED 20 428 - -
Vian9g00016 428 MobiDBLite consensus disorder prediction 140 159 - -
Vian9g00016 428 MobiDBLite consensus disorder prediction 84 101 - -
Vian9g00016 428 MobiDBLite consensus disorder prediction 1 61 - -
Vian9g00016 428 Pfam Protein of unknown function (DUF1666) 193 427 IPR012870 -
Vian9g00016 428 MobiDBLite consensus disorder prediction 140 163 - -
Vian9g00016 428 Coils Coil 338 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00016 Vian-Chr9 202999 205605 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00016 - - gmx:100776804 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00016 9 202999 205605 Vian9g00016 9 202999 205605 ECH