Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00010 ATGTGGAGACTGAAGGTGGCAGATGGTGGAAAGGATCCTTACATTTTCAGCACAAACAATTTCGTAGGAAGACAGATATGGGAGTATGATCCAGACGCCGGTAGCAGCGAGGAACGCGCCGAGGTGGAGGCAGCCAGAAACAATTTCTACCAAAATCGCTTCAAGGTCAAGCCCTGTGCTGACCTCCTTTGGCGCTTTCAGGTTCTGAGAGAGAATAACTTCAAACAAACAATTCCTAATGTGAAGATAGAAGACGGAGAAGAAATAACTTACGAGAAAGTGACGGCAGCTGTTAAAAGAGGCGCATATCATCTATCAGCATTGCAGACCAGTGATGGCCATTGGCCTGCGCAAATTGCAGGTCCTCTGTTTTTCCTTCCTCCTCTCGTATTCTGCATGTATATTACAGGGCATCTGGAATCAGTATTTCCAGAAGAGCATCAGAAAGAAATTCTCCGCTATATATACTATCACCAGAATGAAGATGGAGGATGGGGACTACATATTGAGGGTCACAGCACCATGTTTTGTACTGCACTGAATTATATATGTATGCGGATTCTTGGAGAAGGACCCAATGGAGGTCATGACAATGCTTGTGCTAGGGCAAGAAAGTGGATTCAAGATCATGGAAGTGTAACACACATACCTTCATGGGGGAAAACTTGGCTTTCGATACTTGGTGTATTTGATTGGTGTGGAAGTAACCCAATGCCTCCAGAGTTTTGGATCCTTCCTTCCTTTCTTCCTATGCATCCGGCTAAGATGTGGTGTTACTGTCGATTGGTGTACATGCCTATGTCTTACTTATATGGAAAGAGGTTTGTTGGTCCAATTACGCCTCTCATTTTACAATTGAGAGAAGAACTATTTACAGAACCCTATGAAAAAGTTAACTGGAAGAAAGCGCGTCACCAATGTGCAAAGGAAGATCTATACTATCCTCATCCTTTGATACAAGATCTAATATGGGACAGTTTATACATATTTACGGAGCCATTACTAACTCGTTGGCCTTTCAACAAGCTGGTTAGAGAAAAAGCTCTTCAGGTGACAATGAAACATATTCATTACGAAGATGAGACCAGTCGATACATTACCATTGGTTGCGTGGAAAAGGTTTTATGCATGCTTGCTTGTTGGGTGGAAGATCCAAATGGAGATGCTTTCAAGAAGCATCTTGCAAGGGTGCCAGATTACTTGTGGATGTCTGAAGATGGAATGACCATGCAGAGTTTTGGCAGTCAAGAATGGGATGCTGGTTTTGCAGTTCAAGCTTTGCTTGCCACTAACCTAGTTGAGGAAATTGGTCCAGCACTAGCAAAAGGGCATTATTTCATTAAGGAGTCTCAGGTAAGGGATAACCCTTTTGGAGATTTCAAGGGTATGTATCGTCATATTTCAAAAGGATCTTGGACATTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGCACAGCGGAAGGCTTGAAGTGTTGTCTACTTCTATCCATGTTGCCACCAGAGATTGTGGGAGAAAAGATGGAACCCCAAAGGTTATATGATTCAGTCAATGTCCTATTGTCGCTTCAGAGTAAAAAGGGTGGTTTAGCTGCATGGGAGCCTCCGGGAGCTCAAGATTGGTTAGAATTACTGAATCCGACGGAATTTTTTGCGGACATTGTGGTTGAACACGAATACGTTGAGTGCACTGGATCTGCAATTCAAGCTTTAGTTTTGTTCAAGAAGTTGTATCCAGGGCATAGGAAGAAAGAGATAGAGAATTTCATAATCAACGCAGTTCGATTCCTGGAAAATACACAAACAGGTGATGGTTCGTGGTACGGAAATTGGGGAGTTTGCTTCACTTACGGTTCTTGGTTCGCACTTGGAGGTCTATCAGCTGCTGGCAAGACTTACACCAATTGTGCTGCTATTCGTAAAGCCGTTAAATTTCTGCTCACAACACAGAGGGAGGACGGTGGATGGGGGGAGAGTTATCTTTCAAGCCCAAAAAAGATTTATGTACCGCTAGAAGGAAGTCGATCAAATGTTGTTCATACAGCATGGGCTCTCATGGGACTCATTCATGCTGGACAGGCAGACAGAGACCCTACTCCTCTTCATCGTGCTGCAAAGTTGCTCATCAATTCTCAGTTGGAAGAGGGTGATTGGCCCCAACAGGAAATCACTGGAGTATTCATGAAAAATTGCATGTTGCATTATCCAATGTACAGAGATATTTATCCAATGTGGGCTTTAGCTGAATATCGTAGACGAGTTTCGTTGCCTTCCGATTAA 2283 0.4332 MWRLKVADGGKDPYIFSTNNFVGRQIWEYDPDAGSSEERAEVEAARNNFYQNRFKVKPCADLLWRFQVLRENNFKQTIPNVKIEDGEEITYEKVTAAVKRGAYHLSALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEHQKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHDNACARARKWIQDHGSVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTEPYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLVREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWMSEDGMTMQSFGSQEWDAGFAVQALLATNLVEEIGPALAKGHYFIKESQVRDNPFGDFKGMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMEPQRLYDSVNVLLSLQSKKGGLAAWEPPGAQDWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFIINAVRFLENTQTGDGSWYGNWGVCFTYGSWFALGGLSAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQADRDPTPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVSLPSD 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00010 760 CDD SQCY_1 98 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Vian9g00010 760 Pfam Squalene-hopene cyclase C-terminal domain 418 753 IPR032696 -
Vian9g00010 760 FunFam Terpene cyclase/mutase family member 389 758 - -
Vian9g00010 760 SFLD Prenyltransferase Like 2 77 755 IPR018333 GO:0005811|GO:0016104|GO:0016866
Vian9g00010 760 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Vian9g00010 760 NCBIfam squalene/oxidosqualene cyclases 98 753 IPR018333 GO:0005811|GO:0016104|GO:0016866
Vian9g00010 760 FunFam Uncharacterized protein 119 349 - -
Vian9g00010 760 Gene3D - 493 723 - -
Vian9g00010 760 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 756 IPR018333 GO:0005811|GO:0016104|GO:0016866
Vian9g00010 760 Gene3D - 119 414 - -
Vian9g00010 760 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 755 IPR008930 -
Vian9g00010 760 Pfam Squalene-hopene cyclase N-terminal domain 99 403 IPR032697 -
Vian9g00010 760 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00010 Vian-Chr9 143866 151388 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00010 K15813 K20658 gmx:547702 1536.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00010 9 143866 151388 Vian9g00010 9 143866 151388 ECH