Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00008 ATGGCGGCAATCCAACCACCACAGGCTCCGGATCGTACAACCGAAGAGATACCAGCCGAACCAGATAACATGAAGGAGCAGTCTTCTCAGGGTACAGTGACTATAGGTCATTCGAGGGAGACCACAAGTCAATCAGGCTCTTTAGGTTCAGGTGGAGATGTTCCTCTGTATCCTCCTAATGTGTATGCTCCTCAAGCTCAGGCTTTCTACTATAGAGGTTTTGACAATGGCAACGGTGAATGGGATGAATATTCTTCATATGTCAATTCTGAGGGATTAGAAATTGGATCTCCTGGTGTCTACAATGAAAATCCATCCCTTATTTTCCATTCTGGGTATGGCTTCAACCCCCAAATGCCTTATGGACCGTATTCCCCAGTTACCACACCTTTGCCTTCTGTAGGTGGAGACACACAGTTATACTCCTCGCAGCAATTTCCATACACTGGACCACCTTATTATCCTCAGCTAATTCCTCCTAGCTTATCATATCTCAATTCACCTACTCCAGTTTCACAGCCAGAGCTCACCAACCTGGTAGGTATTGACCAACAAGTTGATAACATATTTTTTGGACCAAGAGCAGGCTATCCATCTGTGGGATCTTTTGGTCGAGGCAGCTTTCCTGTAGCGCCTGGTTCCTTTGGCTTTCATGAATCCCAACAAGGATTTGAAGGATCAAGATCTGGTGGTATCTGGTCAGATTGCTCAAAACCCTCAGAAAGACAAAGATCTTTAATGCCTCTATCGCCATCTGTTTCTCCACGGCCCATGGGCTCACTTGGGTCATTTGGGCCGAGTGTTGGAATGGCCTCTCATCAACAGCCATCATTATATGGGTTTGGATCTGGTTCAAACTCTTATGGTAGGGGCTACCTGCCTAACCACGGCTCTAGCTTTGGAGGTACTTCTATTTCCAATCTTAATGATAGGAGTTGTGCTTCTCTTGAAAATAGCAGGAGGCAAGGGCGGCCATCTGCATCTCTTTGCAATTGTACCGGTACTCTTGATATCCTTAGTGAGCAGAACCGAGGTCCAAGGGCCTCAAAGCTGAAAAATCAAATTTTGGCTGAAAAAAATTCTGTGGATAATGGTAAAAATAGTGCATCTACTGCCAAGTTTCAAAATGAGTCACTCAATCGGTCAGATTTTGCCATAGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTGCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAACGGAAACAGGAAGTTAGATGCTGCATATCGCCAAGCAATGGAGAAGCAAGAGGCCTGCCCTATATTTCTCTTCTTCTCGGTCAATGCGAGTGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGACAAGAGTGTGGACTTCTGGCAACAAGATAAGTGGAGTGGCCAGTTTCCCGTGAAGTGGCACATAATTAAAGACGTTCCAAACAGTCAGTTTCGTCACATTGTTCTTGAAAATAATGATAACAAGCCTGTGACTAACAGTCGAGATACTCAGGAGGTGAAGTTGCCACAGGGTATTGAAATGTTGGCCATTTTTAAAAACTATGAAACTGATGTTTCCATCCTGGATGATTTTGATTTCTACGAAGACCGGCAGAAGGCTATGCAAGAACGGAAGGCAAGGCAGCAAAACAGCATGATGACAACTGGATTAGTTGGAGAAAATGAACATCGGAATTCTGCTAACACTACTGGTGAATTTATGAAGCAGATGACAAAGAGTTTTGCTCTAGTTGTCCGCTTAGATGAGAATAACAACGAAGTTGCCGCGGACAGAGATAATTTAGTCTCTCATGGCCCCATTGGTAACGTAGTTAAATCTGATGATGGTCAATCAGTGCCGGCCTCTTCAACTCAAACCAGTTAG 1914 0.441 MAAIQPPQAPDRTTEEIPAEPDNMKEQSSQGTVTIGHSRETTSQSGSLGSGGDVPLYPPNVYAPQAQAFYYRGFDNGNGEWDEYSSYVNSEGLEIGSPGVYNENPSLIFHSGYGFNPQMPYGPYSPVTTPLPSVGGDTQLYSSQQFPYTGPPYYPQLIPPSLSYLNSPTPVSQPELTNLVGIDQQVDNIFFGPRAGYPSVGSFGRGSFPVAPGSFGFHESQQGFEGSRSGGIWSDCSKPSERQRSLMPLSPSVSPRPMGSLGSFGPSVGMASHQQPSLYGFGSGSNSYGRGYLPNHGSSFGGTSISNLNDRSCASLENSRRQGRPSASLCNCTGTLDILSEQNRGPRASKLKNQILAEKNSVDNGKNSASTAKFQNESLNRSDFAIDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAMEKQEACPIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLPQGIEMLAIFKNYETDVSILDDFDFYEDRQKAMQERKARQQNSMMTTGLVGENEHRNSANTTGEFMKQMTKSFALVVRLDENNNEVAADRDNLVSHGPIGNVVKSDDGQSVPASSTQTS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00008 637 MobiDBLite consensus disorder prediction 1 53 - -
Vian9g00008 637 Pfam YT521-B-like domain 391 529 IPR007275 GO:0003723
Vian9g00008 637 MobiDBLite consensus disorder prediction 221 250 - -
Vian9g00008 637 FunFam YTH domain family 1, isoform CRA_a 370 543 - -
Vian9g00008 637 Gene3D ph1033 like domains 367 543 - -
Vian9g00008 637 ProSiteProfiles YTH domain profile. 391 528 IPR007275 GO:0003723
Vian9g00008 637 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 80 603 IPR045168 -
Vian9g00008 637 CDD YTH 392 528 IPR007275 GO:0003723
Vian9g00008 637 MobiDBLite consensus disorder prediction 221 269 - -
Vian9g00008 637 MobiDBLite consensus disorder prediction 23 50 - -
Vian9g00008 637 MobiDBLite consensus disorder prediction 607 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00008 Vian-Chr9 120547 126226 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00008 K20102 - gmx:100816860 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00008 9 120547 126226 Vian9g00008 9 120547 126226 ECH