Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00007 ATGACAGGGGATGAAGGCCCAAGCTACACAGTAGATGATGCTCTAGTGGCTTTGGGTTTTGGAAAGTTCCAAATTCTGGTGCTTGTTTATGCTGGTGTTGGTTGGGTTTCAGAAGCAATGGAAATGATGCTACTCTCTTTTGTAGGCCCTGCAGTTCAAGCTCTATGGAATCTTTCCCCTCATGAAGAGAGTTTTATAACCAGTGCGGTTTTTGCAGGCATGCTAATCGGGGCATACTCATGGGGCGTTGTTTCTGATAGACATGGAAGGAGGAAAGGATTCCTTATCACAGCGACAGTTACATCCATAGCTGGCTTTCTTAGTGCATTTGCTCCTAACTATATATTATTAATTGCCCTTCGTTCTGTGGTCGGTATTGGTTTGGGAGGTGGACCTGTATTATCATCTTGGTTTCTAGAGTTTGTTCCTGCTCCCAACAGAGGTACCTGGATGGTTATCTTTTCAGCATTTTGGACTCTTGGTACCATTTTTGAGGCCTCACTTGCATGGATTGTGATGCCAAATCTGGGTTGGAGATGGCTTCTTGCGCTGTCTTCTCTTCCCACATCTTTCCTTCTTCTGTTCTACAAATTGACTCCTGAATCACCAAGATACCTATGCTTGAAAGGAAAAACAGCTGATGCAATTGAAGTTTTGGAAAAAATAGCAAGAGTAAATGGAAGAGAACTTCCTTCCGGTAACCTTGTCTCTGACCATGAAATTGAGCTACAGCAAATTGATAACCCTTCAGAGGACGCACGCTTGCTCTCTCCGAGAACAAATGAAATTAAACATCCTTTAGGAATGGATTCCAATTTAGGTGGTATCTCATCATTGTCGGTGCTTCTCTCACCAAAGTTGGCAAGGTCAACAGTTCTGTTATGGGCTGTGTTCTTTGGTAACGCCTTTTCGTATTATGGCCTTGTTTTGTTGACAACTGAGCTGAACGGACATAGTAAATGCGTGTCACATAAATTGCAGACAGAGAAGTCCCAGGATGTTAGTTACAAGAGTGTTTTTATTGCCAGTTTTGCAGAGATACCTGGACTCCTCTTGTCAGCTGTGGCAGTCGACAAACTCGGTCGAAAACTATCAATGTCAACTATGTTCTTCATCTGCTGTATTTTTCTTCTCCCGTTAGTATTCCATCTGTCTGAAGGCTTAACAACGGGCCTTTTATTTCTCGCTCGCATTTGCATCACAGCAACCTTCACAATTGTGTATATATATGCACCAGAGATGTACCCAACATCAGTTAGAACAACTGGTGTGGGAATTGCAAGTTCGGTGGGCAGAATTGGTGGAATGATATGTCCTCTGGTTGCTGTGGGTTTAGTACATGGATGTCATCAAACTGCAGCTGTCCTTCTGTTTGAGATAATAGTACTTCTTTCAGGAATATGTGTCATGTTCTTACCGATTGAGACCATGGGCCAGGAACTGAGAGATAGTGTGCAAGTCTAA 1464 0.4303 MTGDEGPSYTVDDALVALGFGKFQILVLVYAGVGWVSEAMEMMLLSFVGPAVQALWNLSPHEESFITSAVFAGMLIGAYSWGVVSDRHGRRKGFLITATVTSIAGFLSAFAPNYILLIALRSVVGIGLGGGPVLSSWFLEFVPAPNRGTWMVIFSAFWTLGTIFEASLAWIVMPNLGWRWLLALSSLPTSFLLLFYKLTPESPRYLCLKGKTADAIEVLEKIARVNGRELPSGNLVSDHEIELQQIDNPSEDARLLSPRTNEIKHPLGMDSNLGGISSLSVLLSPKLARSTVLLWAVFFGNAFSYYGLVLLTTELNGHSKCVSHKLQTEKSQDVSYKSVFIASFAEIPGLLLSAVAVDKLGRKLSMSTMFFICCIFLLPLVFHLSEGLTTGLLFLARICITATFTIVYIYAPEMYPTSVRTTGVGIASSVGRIGGMICPLVAVGLVHGCHQTAAVLLFEIIVLLSGICVMFLPIETMGQELRDSVQV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00007 487 SUPERFAMILY MFS general substrate transporter 12 482 IPR036259 -
Vian9g00007 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 477 IPR020846 GO:0022857
Vian9g00007 487 FunFam Organic cation/carnitine transporter 7 22 478 - -
Vian9g00007 487 Pfam Sugar (and other) transporter 64 482 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian9g00007 487 ProSitePatterns Sugar transport proteins signature 1. 353 368 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vian9g00007 487 Gene3D MFS general substrate transporter like domains 21 486 IPR036259 -
Vian9g00007 487 PANTHER SYNAPTIC VESICLE GLYCOPROTEIN 2 8 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00007 Vian-Chr9 113429 116810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00007 20 485 Organic Solute Cotransporters AT3G20660 24.951 3.45e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00007 - - gmx:100786568 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00007 9 113429 116810 Vian9g00007 9 113429 116810 ECH