Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01486 ATGAACAGTAGAAGCGGTGCAAACATGGTTCGGCGCAAGCGTTGGAGGCATTCACCGGAAAATTCTCCGTCAAAACGAAGAAGACGTTCTCAGTCTGAATGTCGGAGTAGGAGATGGATTATCTCTTCCAAAGACTCTTCCAATTGCACGGATAAGATTGTGGTTGTTTCATACAATATACTTGGTGTTCAAAATGCATCAAATCATCCGGATCTGTATTCTAATATTCCACATAGGTTCTTGGAGTGGGACAAGCGGAAAAGGCTCATACTTGAAGAGATTAACAACTATAATGCCAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATCTAGACAATCTTTTCAAGAACAGTGGCTTTAAAGGTACTTATAAGGCTCGCACTGGGGAAGCAAAAGATGGATGTGCTGTATTTTGGAAAGACGAGTTATTCAATCTTTTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGCATGCGTAACAATGTTGCCCAGCTGTGTATTTTGGAGGGAAACCATGATAAAAAAGAATCCAACGCATGTAACCTAACCACAATGGAACCATCCACAGGAAAAAGAAGATTTGTTGTGGGAAACATACATGTGCTATTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGGTCAGACTTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTGAATAGTGTTCCACAGAGTGCCATATACAAGTTTCTGTCTTCATCAAAGTTAGACATCCAATTACATGATCGCCGAAATATGTCAGGACAGCTTGAAATCCAGTCCAACAGACTCTTCAGATCACAGATTCGTGATGATGCTAGCATTTCGATGACTCTTTCAAGGCAATTGCTATATAGATGGAGTGTGGAAGAACTAAGAATTGCAACAGGAGCAAAAGGAATCACTCAACTTCAGCACCAGCTCAAACTCCGCAGTGCTTATAGTGGTGTTCCTGGAGACCATAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCCGATGATCTTGTTCCACTTAGAGTTCTTGAAACCTTGCCAATTGATATTCTTAGAAGATCTGGAGGACTCCCCAGTGAGAAATGGGGAAGTGATCACCTAGCTGTTGTATGTGAGTTGGCTTTTAGCAAACAACAACAATGTCTGAGGTCTGAACCTTAA 1257 0.4137 MNSRSGANMVRRKRWRHSPENSPSKRRRRSQSECRSRRWIISSKDSSNCTDKIVVVSYNILGVQNASNHPDLYSNIPHRFLEWDKRKRLILEEINNYNASILCFQEVDHFNDLDNLFKNSGFKGTYKARTGEAKDGCAVFWKDELFNLLHQEDIEFQRFGMRNNVAQLCILEGNHDKKESNACNLTTMEPSTGKRRFVVGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIQSNRLFRSQIRDDASISMTLSRQLLYRWSVEELRIATGAKGITQLQHQLKLRSAYSGVPGDHRTRDDIGEPLATSYHSKFMGTVDYIWHSDDLVPLRVLETLPIDILRRSGGLPSEKWGSDHLAVVCELAFSKQQQCLRSEP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01486 418 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 19 407 - -
Vian8g01486 418 Gene3D Endonuclease/exonuclease/phosphatase 25 416 IPR036691 -
Vian8g01486 418 MobiDBLite consensus disorder prediction 1 31 - -
Vian8g01486 418 SUPERFAMILY DNase I-like 52 406 IPR036691 -
Vian8g01486 418 Pfam Endonuclease/Exonuclease/phosphatase family 57 398 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01486 Vian-Chr8 34311957 34318025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01486 83 257 EF-hand Containing Proteins AT5G54130 25.543 9.32e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01486 - - vra:106769764 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01486 8 34311957 34318025 Vian8g01486 8 34311957 34318025 ECH