Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01448 ATGAAGACAGCACACATTGCTTTGTGCACTTTGGTGGTGCTGCTTGTGGCTGAAGTTCAAGTGTCAATGGCAGTAACATGCAGCCCAGTACAGCTGAGTTCATGTGTGAGTGCAATAACCTCTTCAACTCCTCCATCAAACCTATGCTGCTCCAAGATCAAGGAACAGAAACCATGCCTTTGCCAATACCTCAAGAACCCCAATCTGAAGAGGTTTGTGGACTCACCTAATGCAAGGAAAGTTGCTAGCACTTGTGGAACTCCCTTCCCAAGTCCTAATGGATATGTGATGCTTTGCTTTCATGTCATTCCATTTCAGTTCCTTGGTGTGGTCTCACCTTACGTAACGTTAGCTGTTGCAAAAGACTGTATTTATAATTCAAAGAATGATCTCATTATGTGTCCTTCTTAA 411 0.4331 MKTAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCLCQYLKNPNLKRFVDSPNARKVASTCGTPFPSPNGYVMLCFHVIPFQFLGVVSPYVTLAVAKDCIYNSKNDLIMCPS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01448 136 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 91 IPR033872 GO:0006869
Vian8g01448 136 CDD nsLTP2 27 91 IPR033872 GO:0006869
Vian8g01448 136 Gene3D - 25 92 IPR036312 -
Vian8g01448 136 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 91 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01448 Vian-Chr8 33837574 33838208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01448 1 90 Acyl Lipid Metabolism Gene Families AT3G18280 57.143 2.53e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01448 - - tcc:108661085 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01448 8 33837574 33838208 Vian8g01448 8 33837574 33838208 ECH