Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01443 ATGGCGAACGATACATCATCTGATTCTGATAATGAAATTATCGGAGCACGAGTAAAGCTCTTTGGACATGAAAAACCGATACATCAAGTTCTTGGAGGAGGAAAAGTGGCAGATATGCTGTTATGGAGGGACAGAAATTTATCAGCTGCGCTTTTGGGAGGGATGACAGTGATATGGTTTCTATTTGAGATTGTTGAATACAATTTCGTGACTCTCCTTTGTCACATTTCCATCACCACCATGCTTGTGCTATTCATATGGTCCACAGCTGCAGATATATTCAAATGGAAACCTCCCCAGATTCCAGACATTATTTTACAAGAATCTTTCTTCCAAAGTCTTGCTTACATTCTCCACAGAAGATTCAACCAGTTACTACCAATGCTCCTCCATATTTCATGTGGAATAGACCTGCCAATCTTTCTTCTGAACATTGTGTCCCTCTATATTTTCTCAGTGATTGGAAGCTACTTCAGCTTTGTCAATCTGCTATATATTGGTTTCCTGTGCGTCCACACGCTGCCAATTGTGTATGAACGATATGAGGAAGAAATCAACAATTGGGTGAGCGATATGATAATCGTTCTCAGAAAAAACTACAGGAGTTTTAAGAAGAACTACCTCAACAGAATTCCCAGAGGACCAGTAAAGCCAAAGAAAACCCAATAA 669 0.3976 MANDTSSDSDNEIIGARVKLFGHEKPIHQVLGGGKVADMLLWRDRNLSAALLGGMTVIWFLFEIVEYNFVTLLCHISITTMLVLFIWSTAADIFKWKPPQIPDIILQESFFQSLAYILHRRFNQLLPMLLHISCGIDLPIFLLNIVSLYIFSVIGSYFSFVNLLYIGFLCVHTLPIVYERYEEEINNWVSDMIIVLRKNYRSFKKNYLNRIPRGPVKPKKTQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01443 222 Pfam Reticulon 36 190 IPR003388 -
Vian8g01443 222 PANTHER RETICULON 19 212 - -
Vian8g01443 222 ProSiteProfiles Reticulon domain profile. 36 222 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01443 Vian-Chr8 33798385 33799690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01443 - - pvu:PHAVU_004G154000g 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01443 8 33798385 33799690 Vian8g01443 8 33798385 33799690 ECH