Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01427 ATGTCGCTCCACGGTAGCGACCGCCGCGACATGTCGGGCGTCGGCGGAAACGGCATGGTGGCGGCGGCGAGCCTGAGGCTGCGGCTGAACCCTAACAAGGAGCACAAGCCAGATGGCTACGAGGACCTGCAGTTGGATTTCAGCCCTAACATCTTCAGCTCCTTGGAGAGGTACCTCCCTCCGAGCATGCTCAACGTGCCTCGTGACGATAAGGCCAAGTTCATGCGCGAGATTCTGCTCAAGTATCTACCCCTTGGGGAACGCAGCAGATCTCAAAAGCATAGAGAATACAGACAGAAGATAATAGAAAATTATCAGCCTCTGCATCGGGAGTTGTACTCTGTGAATCCTGCTACATTCTTCGTTCCCTCATTTCTGAGAGCAATTAATGATAATACTGAGCAAAGCTTTAGAAGTATAATGTCTGAGCCCTCTCCTGGCATTTTTATATTTGACATATTTCAGACCAACTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAGTTTCGGATCATGCGTCCCAATACAATGAATAAATATGGTGCTGTTCTTGATGACTTTGGACTTGAAACAATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTTTATCCAGAGTCTTATTTGCGGAAGTTGGTGGGGCAACCCTGGATTCTCATCATGGTTTTGTTGTTGAATATGGTAAAGATAGAGATGTTGACTTGGGTTTCCATGTAGATGACTCAGAAGTAACCTTGAATGTTTGTTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTCCGGGGCATACGATGTGAGAAACATGTAAATACTGGAACTCATTCAGAGGAGATCTTTGATTATTCTCATGTTCCTGGACGAGCTGTGCTTCATCGTGGTCGACACCGCCATGGTGCTAGAGCTACAACATCCGGCAATCGGGTCAACCTACTTCTATGGTGCAGAAGTTCTGTCTTTAGGGAGATGAAACGGTATCAAAAAGATTTCTCCAGCTGGTGTGGCGAGTGCAGTCGTGAGAAAAAGGAAAGGCAACGCTCAACAATTGCTGCTACCAAATTGGAGTTGTTCAGGAGGGAAGGTGAATCCACTGCATAA 1125 0.4569 MSLHGSDRRDMSGVGGNGMVAAASLRLRLNPNKEHKPDGYEDLQLDFSPNIFSSLERYLPPSMLNVPRDDKAKFMREILLKYLPLGERSRSQKHREYRQKIIENYQPLHRELYSVNPATFFVPSFLRAINDNTEQSFRSIMSEPSPGIFIFDIFQTNFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGTHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRREGESTA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01427 374 SMART p4hc 146 325 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vian8g01427 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 326 IPR005123 -
Vian8g01427 374 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 23 363 - -
Vian8g01427 374 Gene3D q2cbj1_9rhob like domain 146 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01427 Vian-Chr8 33610767 33616933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01427 - - gmx:100816390 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01427 8 33610767 33616933 Vian8g01427 8 33610767 33616933 ECH