Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01406 ATGAGAAGGGTACCCTCCATTCTGTTCAGAACGCTCGCCGCCCGACGCGCCACCTCCTACGTCGTCCAAAGCCGCCTTCTCCACGGCAGCCCCACCGCCGCCGACCACTCCCACCGTCGCCGCTTCTCCTACCTCCTCGCTCCCTTTGCCGCCGCGTCTCTCGGATTCGCCGGCGCCCTCTTCTCCCAGGAAGTCCTCGCTAAGGAGCCTCCGCCGCCCGAGGCCCTTCCACGCGAGGTCGTTCTTTACCAGTTCGAGGCTTGCCCTTTCTGCAACAAAGTCAAAGCATTTTTGGACTACTATGATATACCTTACAAAGTTGTGGAAGTCAACCCTCTTAGCAAAAAAGAAATCAAATGGTCTGAATATCAGAAAGTGCCAATATTGATGGTCGATGGCGAGCAGCTAAATGATTCATCAGCTATAATTGATAAGCTGGGACTTAAGATTCTGTCGAAGAAAATTCCAGAGTCAACTTCTGAGGATGAAGAGACAAAATGGCGACGGTGGGTTGATAACCATTTAGTGCATGTTCTGTCACCAAATATTTATCGAAATACCACTGAAGCACTTGAATCCTTTGAGTATATTACTAGCAACGTTGCTGGAGTTCAGGTTGCCCACAGGTCATTGGTTCAGGTCTCTGGCACAGGCAATTTCAGCTACATAGAAAAACTTTCGGTGAAGTTTGCTGGAGCTGCAGCTATGTATTTTGTGTCTAAGAATCTGAAGAAGAAATACAACATAACTGATGAACGTGCTGCACTTTATGAGGCAGCAGAAACATGGGTAAAAGCTCTAAATGGCCGAGATTTCCTTGGAGGGTCTAAACCTAACTTAGCCGACCTGGCGGTCTTTGGGGTTTTAAAACCCATACGCTATTTGACGTCTGGCAAGGATATGGTGGAGCACACTCGTATTGGTGAGTGGTATGCAAGAATGGAGAGTGCTGTTGGAGAACCTTCCAAGATTAAACCCTAA 981 0.4842 MRRVPSILFRTLAARRATSYVVQSRLLHGSPTAADHSHRRRFSYLLAPFAAASLGFAGALFSQEVLAKEPPPPEALPREVVLYQFEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPILMVDGEQLNDSSAIIDKLGLKILSKKIPESTSEDEETKWRRWVDNHLVHVLSPNIYRNTTEALESFEYITSNVAGVQVAHRSLVQVSGTGNFSYIEKLSVKFAGAAAMYFVSKNLKKKYNITDERAALYEAAETWVKALNGRDFLGGSKPNLADLAVFGVLKPIRYLTSGKDMVEHTRIGEWYARMESAVGEPSKIKP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01406 326 Pfam Glutathione S-transferase, N-terminal domain 82 146 IPR004045 -
Vian8g01406 326 SFLD Prostaglandin E synthase like 59 324 - -
Vian8g01406 326 Gene3D Glutaredoxin 74 153 - -
Vian8g01406 326 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 32 325 - -
Vian8g01406 326 Gene3D - 157 324 - -
Vian8g01406 326 CDD GST_C_mPGES2 157 320 IPR034335 -
Vian8g01406 326 SFLD Prostaglandin E synthase like.1 59 324 IPR034334 GO:0050220
Vian8g01406 326 SUPERFAMILY GST C-terminal domain-like 154 318 IPR036282 -
Vian8g01406 326 Pfam Glutathione S-transferase, C-terminal domain 253 313 - -
Vian8g01406 326 ProSitePatterns Glutaredoxin active site. 82 98 IPR011767 -
Vian8g01406 326 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 78 154 IPR004045 -
Vian8g01406 326 SUPERFAMILY Thioredoxin-like 80 148 IPR036249 -
Vian8g01406 326 ProSiteProfiles Glutaredoxin domain profile. 68 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01406 Vian-Chr8 33319817 33325270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01406 K05309 - gmx:100811576 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01406 8 33319817 33325270 Vian8g01406 8 33319817 33325270 ECH