Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01401 ATGTCCGTCGAACTCAAGCTCTCTCGTTCTAATCGTATCTATCGCCCTTCGGAAGCTCTGGAAGGCAAAATCGTTTTCAAAACTCAGTCTTCAATTTACCACTATGGAATTCGCCTCACTGTCAAAGGATCCGTCAACTTGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAATCGTTCTACGGCGTTATTAAGCCTATCCCAATTGTGAACAGGATCACTGAGATAAAATCTTCTGGAAAGATTGGCTTGGGTACATCAGAGATACCATTCTCGTTGAAGCTACGGCAGCAGGATGAAAATTTAGAAAGATTTTATGAGACGTTCCATGGTGCAAATATAAGCATCCAGTATTTGGTGACTGTAGATATACCTCGTGGATACTTGCATAAATCATTATCAGCAACAACAGAGTTCATAGTTGAAAGTGATAAAGCTGATCTTCCACAAAGACCACTTTCTCCAGAGATGGTAATCTTTTACATCACCCAAGACACTCAAAGGCATTCTCTACTTCATGAATTAAAATCTGGTGGATTTCGGGTGACAGGAAAAATCTCAACTCAGTGTTCTTTGTCTGGCACTATTAGTGGTGAGCTAACTGTAGAAGCTTCTGCAGTTCCAATTCAGGCAATTGACATTCAGCTGTTTCGAGTGGAATCCATTCTTCTTGGGGAGAAAATTGTGACTGAAACCTCTCTGATTCAAACAACACAGATAGCAGATGGAGATGTATGCCGAGGTTTGACTCTACCTATTTATGTAATACTACCTCGTCTTCTGACATGTCCAACAACCTTAGCTGGTCCCTTCTCAATTGAGTTCAAAGTTGCAATTGTTATAAGCTTTCAGGCAGAGCTAAGTAAATTGCATAAGAAATCTGACCCCAAAACTCCAAGACTAGGGATGGCGATGGAAACATTACCACTTGAGTTGGTTAGGGCAAAGTAA 951 0.4143 MSVELKLSRSNRIYRPSEALEGKIVFKTQSSIYHYGIRLTVKGSVNLQVRGGSAGVVESFYGVIKPIPIVNRITEIKSSGKIGLGTSEIPFSLKLRQQDENLERFYETFHGANISIQYLVTVDIPRGYLHKSLSATTEFIVESDKADLPQRPLSPEMVIFYITQDTQRHSLLHELKSGGFRVTGKISTQCSLSGTISGELTVEASAVPIQAIDIQLFRVESILLGEKIVTETSLIQTTQIADGDVCRGLTLPIYVILPRLLTCPTTLAGPFSIEFKVAIVISFQAELSKLHKKSDPKTPRLGMAMETLPLELVRAK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01401 316 FunFam Vacuolar protein sorting-associated protein 26 183 290 - -
Vian8g01401 316 FunFam Down syndrome critical region protein 3 1 144 - -
Vian8g01401 316 Gene3D - 1 144 IPR014752 -
Vian8g01401 316 Gene3D - 183 293 IPR014752 -
Vian8g01401 316 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 10 291 IPR028934 GO:0006886
Vian8g01401 316 Pfam Vacuolar protein sorting-associated protein 26 9 281 IPR028934 GO:0006886
Vian8g01401 316 SUPERFAMILY E set domains 3 172 IPR014756 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01401 K25730 - gmx:100820593 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01401 8 33226797 33230805 Vian8g01401 8 33226797 33230805 ECH