Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01399 ATGGCGGATCAGAGCCCCAAACCAGAGACCTTCGAGCTCAGCAATGGCAGCATGAAGATTCTCCTCACCAATCTCGGATGCACCATCATCTCCTTATCTGTTCCCGGAAAAGATGGGGTGTTATCCGACGTCGTTCTTGGCCTCGACTCTGTTGAATCCTATGAGAAAGGTCTTTCTCCATATTTTGGCTGCATTGTGGGTCGGGTTGCAAACCGAATCAAGGATGGCAAATTTACACTTGATGGAGTTCAGTACACTTTGCCTCTGAACAAACCCCCAAACAGTCTCCATGGTGGAAATATTGGGTTTGATAAGAGGGTATGGGAGGTAGTTGAACATAAAAAAGGAGAAACTCCTTCAATCACTTTCAAGTATCACAGTCAGGATGGAGAAGAAGGTTATCCTGGGGATATCACTGTTACAGCCACATACACCCTCACCTCAAACACAACTCTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAACCCACCATAGTTAACTTAGCTCAGCACACCTACTGGAACTTAGCTGGTCACAACTCAGGGAATGTACTTGACCATTCAATTCAGATATGGGCTAATAATATCACTCCTGTAGATGAGAATACTGTGCCAACAGGTGAAATCATGGCAGTGAAGGGTACCCCTTTTGATTTTACATCTGAGAAAAGAATAGGGAACGATATTAGTGAAGTTGGATTGGGATATGACCACAATTTTGTGCTGGATTGTGGAGAAGAGAAAGATGGTTTGAGGCATGTTGCCAGAGTGAGGGATCCATCAAGTTCAAGAGTACTTAACTTGTGGACAACTGCCCCTGGTGTGCAATTTTACACTGGAAACTATGTTAATGGTGTTAAAGGAAAAGGAGGTGCCATATATGAAAAACATGCAGGGTTATGTCTGGAGACACAAGGATTCCCTAATGCTATAAACCAACCAAATTTTCCATCTGTTGTGGTTCGTCCGGGGGAGAAGTATAGACACACGATGTTGTATGAGTTTTCAATTGAGTGA 1020 0.4392 MADQSPKPETFELSNGSMKILLTNLGCTIISLSVPGKDGVLSDVVLGLDSVESYEKGLSPYFGCIVGRVANRIKDGKFTLDGVQYTLPLNKPPNSLHGGNIGFDKRVWEVVEHKKGETPSITFKYHSQDGEEGYPGDITVTATYTLTSNTTLRLDMEGVPKDKPTIVNLAQHTYWNLAGHNSGNVLDHSIQIWANNITPVDENTVPTGEIMAVKGTPFDFTSEKRIGNDISEVGLGYDHNFVLDCGEEKDGLRHVARVRDPSSSRVLNLWTTAPGVQFYTGNYVNGVKGKGGAIYEKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYRHTMLYEFSIE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01399 339 PIRSF GALM 2 339 IPR015443 GO:0016853|GO:0019318
Vian8g01399 339 FunFam Aldose 1-epimerase 2 338 - -
Vian8g01399 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Vian8g01399 339 CDD galactose_mutarotase_like 11 336 IPR047215 GO:0016853
Vian8g01399 339 SUPERFAMILY Galactose mutarotase-like 8 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian8g01399 339 PANTHER ALDOSE-1-EPIMERASE 8 338 - -
Vian8g01399 339 Gene3D - 2 339 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01399 Vian-Chr8 33214114 33216597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01399 7 337 Miscellaneous Gene Families AT3G47800 50.453 5.65e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01399 K01785 - gmx:100776238 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01399 8 33214114 33216597 Vian8g01399 8 33214114 33216597 ECH