Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01398 ATGGCGTCTCAGAAGGCGATCGGTTTTGTCGGCGTTGATGAGTTCAGCTTGGAGATGGCGCATTCTGCGATTCGCCGTGGATACGGTGTGCGAGCTTTTGAGATAAATAATCCTGTCATTGAAGAAATCGTGAAGCTTGGAGGAGTGAGATGTTCAAGCCCATCGGAAGCTGGGAGAGATGTAACAGCTCTAGTTATCCTAATATCTCACATAGATCAAACTAATGATCTCATTTTTGGAGATGAGGGTGCTTTGAAAGGTCTAAAACCAGATACTGTTCTTATTCTCCGTTCCACCTTATTACCATCATTTCTCCATAAACTGGAGAAGGATCTAGCAGAAATTCATGAGATTGCTTATGTTGTTGATGCATATGTCTCTTATGGGAGATCCGATGCTTTGAATGGAAAAGTCATCATTGCATCATCTGGAAGACTAGATGCAATTGCACGTGCACATCATATTCTTACTGCAATGTGTGAAAAGCTCTTCACTTTTGAGGGTGAAATTGGTGGTGGCAGCAAGGTTAAAATGGTTAATGTGATGCTGGAAGGCATTCATTTCATCAATGCAGTGGAGGCTCTCTCTCTTGGTGCCAAAATTGGAATTCATCCTTGGATAATCTATGATATAATTTCCAATGCTGCAGGAAATTCATGGGCGTTCAAGAATTATTTACCCCTTTTGTTGAAGGGAGAGGTTAATCTTCAAATTCTGAACACTTTTATTAAGGAGTTGGAAACCATTTTGAATATGTCCAAGTCACTTACTTTTCCGCTTCCAATTTTGGCTGCTACTCATCTACAACTTATTCACGGGGCTTCACTTGTTGATAGTGGAGAAGATGTTACAGTATTGACCAAGGTTTGGGAAAAGGTTTACGGGGTTAAAATTTTAGATGCTGCAAATGCTGATGCGTATAACCCAGAGCAACTGGCATCTAAATTTACTACTGATTCTAAGAGTGTGAGAAGGATTGGTTTTATCGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCATTTACTGAGTTCAGAATTCTGCGTTGTTGGTTATGACGTGTATAAACCAACCCTAAAACGATTCACAAATGCTGGTGGCCTGATTGGAAATTCTCCAGCTGAAGTGAGCAAAGATGTTGAAGTTCTCATAATTATGGTCACAAATGAATCGCAAGCAGAAAATGTTTTATTTGGAGAAAATGGAGCAGTTTCAGCTCTTACACCTGGAGCATCTATCATTCTTTCTTCCACGGTTTCCCCTGCATACGTGAGTCAGTTGGAGCATAGATTGCAAAGTATGTTACTTCTCCAGAACCTTTTTGTATTGAACTTGAGCACAGGAATAGTTCCAGTCAACTTCACGGTCTCCGGCACCCATCACTGCTGCTGTTGTCGCGTCGCCGCCGCCGCCGTCGCCGGAGCACCAGAATCGACCGGCGACCACACCATCGGAAGCGTCTCGGCCGGGCGACCACCTCGGTCTCGCAAGCCAACAGTGGCAAATTCTGATCCACCTCCCCGATCACCAATAGACACCTTATTGAAACAACTCGTACACTTCTTATTCATGGTCAAGTACCCTCACGTTTTTGGGGTGATGCAGTTCTCACAGCATGTTATCTTATCAACTGCATGCCATCTTCCTTCTGTACCTCTCCCTGTTACTATTATCTCCATCTTTTTATACTTTCTGTTGTTGGTTGCAGGTGGTGGCAAAAATGACCTCTGGGGAGTCATCTGGATTGGTATACATCTTGGAGGAAACAGGGTTAATGAACTAAGACTAGTTGACCATTGGGATGCAGTTGTTCGTATACTGAAAAGCAAAGTGTTTGAATTGAAATTTGGAGATATATCAAGACTGAGTTTGTTAACTCAAGCAACCAGGGGAGTGTTAGATGTTAAGATACAAGGAAGTAATACTGGAACTAAAGTGGATTGTGGAACTGATGATGCCCTTAAGACCTTGAGCGAGAAGCTTTATATCATCAAAGCTTGTTCATGTTGTCTACACAAGAGTAGATATCTTATTGAAACAACTCGCACCATTTTAATTCATGGTATATGTGCTATTCATGAACTAAGTTCTCTTACTTGTCATGACATTTCCTTTGCAGTTAGATCTTCTGGAAAAGAAGATCTACTTTCGGTGCGCCATGAAGAAGCCAAGCAAGCCGTTGAAGTATCCGTTGGGTTGAATAGCTGGTTCATCCTTGGTTTTGTAATAAAATTTTTAAGGCACACGATTTTAGACATGGTAAGATATGCATTTTCGTTCAAACAAATAACCTCTGGAGTTTCAGATTTTAGTAAAGGCTCCCAGATGTTTTATCATTCCTGTGACCTCACAAGTTGGGTTATCCACCTATCTATAGGAATAATCAATGCGAAAGTTGTTACTCAATTGGACATGATTCTACTAATAACCATGGCTCCACCACTTGTCATATTAAATCTGGACACTGCAGCGAAATCATTTGACAGCATTGACTATTCCGTAGTTTTGAGGGGAGATTCAACTTTACGAGCAGATGCGGTTAGGAGAAGACAAATGGCCGAATACTTGCTATTAATGCAGCTAGCAGAATTGACAGGAAAACGTTTCTTGTGTCGCACTGCTGCTAGTTTTGTCTCTGCCCTTATGGGAATCATCTCTAAGCCTCCAATATTGCCAAGTGATCTAGGAATAGCTAATGAAAAGAATGGTGGTCTGATAGTTGTGGGGTCCTATGTTCCAAAAACAACAAAGCAGGTTGAAGAACTCAAACTACAGTGTGGTCAGTTCTTAAAAAGCATTGAGGTATCAGTTGAAAAACTTGCAATGAGCCCTATTGAGGCGAGGGAGGAGGAAATCAGTAGAACAGCTGAATTAGCAGACGTATATCTTAAAGCTCATAAAGACACTTTAATAATGACCAGCCGAAATCTCATAACTGGAAGAACTGCAGCTGAGAGTTTGGACATTAACTATAAAGTGAGTTCTGCTTTGGTGGAAATAGTGAAAAGAGTAACTACAAAACCTCGCTATATAATTGCAAAGGGTGGTATTACGTCTTCAGACCTCGCTACGAAAGCCCTTGGTGCAAGATGTGCGAAGATAGTTGGACAAGCACTTGCTGGTATTCCCTTGTGGCTATTAGGCCCTGAAAGTAGACATCCTGGAATTCCTTACATTGTCTTCCCTGGTAATGTTGGTAACAGCACAGCATTGGCAGAAGTTGTGAAGTCATGGACTCACCCAATCATTTTTACATCAACGAAAGAAATTCTTAATAATGCAGAAAAGGGTGGTTATGCTGTTGGAGCATTTAATGTCTACAATTTGGAAGGAGTTGAAGCTGTTGTTTCTGCTGCAGAGGAAGAACAGAGTCCTGCTATATTACAGATCCATCCAGGGGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAAAGCAAGCCAGTGTTCCAATTACTGTTCACTTTGATCATGGAACTTCAAAGCAGGATCTTGTGGAAGCTCTTGATCTGGGATTCAGTTCCATTATGGTTGATGGTTCACATCTTTCTTTCAACGAAAATGCTGCATACACAAAATTTATAACATTACTGGCGCACTCAAAAAATATGCTGGTGGAAGCTGAGCTAGGAAGATTGTCAGGGACAGAAGATGATTTGACTGTAGAAGAGTTTGAAGCCAGACTAACCGATGTGAATATGGCATCAAAATTCATAGATGAGACCGGAATAGATGCTTTGGCAGTGTGTATTGGTAATGTGCATGGGAAGTACCCTGCAAGTGGTCCAAATCTCAGACTTGATCTGCTCAAGGAGCTGCATGCTTTGAGCCTGAAGAAAGGAGTTTATCTGGTGCTTCATGGTGCGTCTGGTTTGAGCAAAGAACTTGTTAAGGAGTGTATAAATCTTGGTGTTAGAAAGTTCAATGTGAACACCGAAGTAAGGAAAGCATACATGGACTCCCTGATTAACCCCAAGAACGATCTAGTTCATGTCATGGCTTCTGCTAAGGAAGCCATGAAAGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCTGGAAAGGCGTAA 4089 0.4182 MASQKAIGFVGVDEFSLEMAHSAIRRGYGVRAFEINNPVIEEIVKLGGVRCSSPSEAGRDVTALVILISHIDQTNDLIFGDEGALKGLKPDTVLILRSTLLPSFLHKLEKDLAEIHEIAYVVDAYVSYGRSDALNGKVIIASSGRLDAIARAHHILTAMCEKLFTFEGEIGGGSKVKMVNVMLEGIHFINAVEALSLGAKIGIHPWIIYDIISNAAGNSWAFKNYLPLLLKGEVNLQILNTFIKELETILNMSKSLTFPLPILAATHLQLIHGASLVDSGEDVTVLTKVWEKVYGVKILDAANADAYNPEQLASKFTTDSKSVRRIGFIGLGAMGFGMATHLLSSEFCVVGYDVYKPTLKRFTNAGGLIGNSPAEVSKDVEVLIIMVTNESQAENVLFGENGAVSALTPGASIILSSTVSPAYVSQLEHRLQSMLLLQNLFVLNLSTGIVPVNFTVSGTHHCCCCRVAAAAVAGAPESTGDHTIGSVSAGRPPRSRKPTVANSDPPPRSPIDTLLKQLVHFLFMVKYPHVFGVMQFSQHVILSTACHLPSVPLPVTIISIFLYFLLLVAGGGKNDLWGVIWIGIHLGGNRVNELRLVDHWDAVVRILKSKVFELKFGDISRLSLLTQATRGVLDVKIQGSNTGTKVDCGTDDALKTLSEKLYIIKACSCCLHKSRYLIETTRTILIHGICAIHELSSLTCHDISFAVRSSGKEDLLSVRHEEAKQAVEVSVGLNSWFILGFVIKFLRHTILDMVRYAFSFKQITSGVSDFSKGSQMFYHSCDLTSWVIHLSIGIINAKVVTQLDMILLITMAPPLVILNLDTAAKSFDSIDYSVVLRGDSTLRADAVRRRQMAEYLLLMQLAELTGKRFLCRTAASFVSALMGIISKPPILPSDLGIANEKNGGLIVVGSYVPKTTKQVEELKLQCGQFLKSIEVSVEKLAMSPIEAREEEISRTAELADVYLKAHKDTLIMTSRNLITGRTAAESLDINYKVSSALVEIVKRVTTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWLLGPESRHPGIPYIVFPGNVGNSTALAEVVKSWTHPIIFTSTKEILNNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQIHPGALKQGGIPLVACCISAAKQASVPITVHFDHGTSKQDLVEALDLGFSSIMVDGSHLSFNENAAYTKFITLLAHSKNMLVEAELGRLSGTEDDLTVEEFEARLTDVNMASKFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELHALSLKKGVYLVLHGASGLSKELVKECINLGVRKFNVNTEVRKAYMDSLINPKNDLVHVMASAKEAMKAVVAEKMHLFGSAGKA 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01398 1362 Gene3D - 319 492 - -
Vian8g01398 1362 Gene3D - 1 167 - -
Vian8g01398 1362 Gene3D Aldolase class I 1079 1362 IPR013785 -
Vian8g01398 1362 Gene3D - 168 298 IPR013328 GO:0016491
Vian8g01398 1362 SUPERFAMILY Aldolase 1085 1362 - -
Vian8g01398 1362 SUPERFAMILY YgbK-like 836 1075 - -
Vian8g01398 1362 Gene3D - 896 1078 IPR042213 -
Vian8g01398 1362 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 328 341 IPR002204 GO:0016491
Vian8g01398 1362 CDD TBP_aldolase_IIB 1087 1360 IPR000771 GO:0005975|GO:0008270|GO:0016832
Vian8g01398 1362 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 325 433 IPR006115 GO:0050661
Vian8g01398 1362 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 IPR006115 GO:0050661
Vian8g01398 1362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 163 IPR036291 -
Vian8g01398 1362 Pfam Nucleotide-binding C-terminal domain 905 1071 IPR031475 -
Vian8g01398 1362 MobiDBLite consensus disorder prediction 476 509 - -
Vian8g01398 1362 NCBIfam ketose-bisphosphate aldolase 1083 1362 IPR000771 GO:0005975|GO:0008270|GO:0016832
Vian8g01398 1362 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED 3 297 - -
Vian8g01398 1362 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 287 IPR029154 GO:0051287
Vian8g01398 1362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 324 433 IPR036291 -
Vian8g01398 1362 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 297 IPR008927 -
Vian8g01398 1362 Pfam Fructose-bisphosphate aldolase class-II 1086 1361 IPR000771 GO:0005975|GO:0008270|GO:0016832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01398 - - aip:107617544 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01398 8 33172739 33211859 Vian8g01398 8 33172739 33211859 ECH