Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01312 ATGGAGAAACTCAGGCCAGCGTGGGCTGTCAAGGCAATCATCGTCATCCTTTTCACTTCGATTCTTTTCCGATGCGTCTGCGGCGAGAATCATACCGTCGGCGGAGCCTCAGGCTGGGATCTCCGTTCCAACATCCAGGCCTGGTCGTCTACGACGACGTTTAATATCGGAGACGATCTCGTATTCTCGTACACGCCAGTTCACGATGTGGTGGAGGTAAACCAACTAGGTTACGACACGTGTACGATAACCAACGCCCTTGCCACGTATGATAATGGAGAAACCGTGATTCACTTAGGCGGAGCGGGAACACGATACTTCGTGTGTGGCAGAATGGGCCACTGTCAACAGGGCCTTAAACTCCAGGTCCAAGTTCTAGCCCAGTCCAACAACGGAAGCAACGACGATCAAAACCAAGGCCCCGGCAGCACCACCTCTTCTCCTCCGCCTCCTTCTCCTCCGCAGCCTCGTTCCCCTCCTCGGCCTCCTTCTCCCCCGCCTCACGGTGTCGAACAACCTCCTGCAGATGAGCCCTCACCCTGCGACTGTTCCGGTGCAGACGAGCGTTTTGGGGTGGTGCCGTTAATTACGCTCGTAATCGTGCTCGCTTTCGCCCGCGCTCCTTCTTCGCTTTTCCACGCCTCCGTTTTCATCTCATGCGTTTAA 666 0.5571 MEKLRPAWAVKAIIVILFTSILFRCVCGENHTVGGASGWDLRSNIQAWSSTTTFNIGDDLVFSYTPVHDVVEVNQLGYDTCTITNALATYDNGETVIHLGGAGTRYFVCGRMGHCQQGLKLQVQVLAQSNNGSNDDQNQGPGSTTSSPPPPSPPQPRSPPRPPSPPPHGVEQPPADEPSPCDCSGADERFGVVPLITLVIVLAFARAPSSLFHASVFISCV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01312 221 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Vian8g01312 221 MobiDBLite consensus disorder prediction 144 174 - -
Vian8g01312 221 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Vian8g01312 221 MobiDBLite consensus disorder prediction 130 183 - -
Vian8g01312 221 PANTHER BLUE COPPER PROTEIN 30 144 IPR039391 GO:0009055
Vian8g01312 221 FunFam Blue copper 27 131 - -
Vian8g01312 221 CDD Phytocyanin 30 125 - -
Vian8g01312 221 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Vian8g01312 221 Gene3D - 28 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01312 Vian-Chr8 32086889 32088347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01312 13 162 Miscellaneous Gene Families AT2G32300 37.500 4.28e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01312 - - gmx:102664120 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01312 8 32086889 32088347 Vian8g01312 8 32086889 32088347 ECH