Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01299 ATGGCTCAAGATCTCAAACCCTCCATCAGCTCCTTCTCGCTCCCCAAAACCCTAAAGCTCAAGACCAAGCAGCAGGAGCTCCTCATCCGCGTCGCCACACTCGCCCTCATCTACGTCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTATGAGTCCATGATTCACGAGTTCGACCCCTACTTCAACTACCGCACCACGCTCTTCCTCACTCGCAATGGCTTCGCCGAGTTCTGGAACTGGTTCGACTCCGAGTCCTGGTACCCGCTCGGCCGCATCATCGGCGGCACGCTTTACCCCGGCCTCATGCTCACCGCCGCTGCCATTCACTCCTTACTCCGCTTCCTCCGCCTCTTCGTTCACATCCGGGAGGTCTGCGTCCTCACGGCCCCTTTCTTCGCCTCCAATACCACTCTCGTCGCGTATTTCTTTGCCAAGGAGGTCTGGGACTCCGGCGCCGGCATTGTTGCCGCGGCGCTCATCGCGATCTGTCCTGGGTACATCTCGCGCTCCGTCGCTGGCTCTTACGACAACGAGGGCGTGGCGATCTTCGCGCTGTTGCTGACCTTTTACCTCTTTGTGAAGGCCGTGAACACTGGGTCGCTGGCGTGGGCTTTGGGTTCGGCGTTTGGGTACTTCTACATGGTGTCCGCGTGGGGAGGTTACGTTTTTATAATCAATTTGGTGCCGCTTTATGTGCTGGTGCTGCTTGTGACTGGGAGGTACTCGTTGAGGTTGTATGTGGCGTATAACTGCATGTATGTCTTGGGGATGCTGCTGGCAATGCAGATTAGATTTGTGGGGTTCCAGCATGTGCAGTCCGGGGAGCACATGGCGTCAATGGGTGTGTTTTTCTTGCTGCAGGTGTTTTTCTTCCTGGATTGGGTGAGGCATTTGCTTAGTGACACCAAGCTCTTTCAGTCTTTTTTGAAGATCACTGTGACCAGTGCGGTTGCTGTTGGTGCTGTGGCTTTGGGAGTGGGCATGGCGTCTGGTTATATTTCTCCATGGACTGGGAGGTTTTACTCCTTGCTTGATCCAACTTATGCCAAGGATCACATTCCGATTATAGCATCTGTCTCTGAGCATCAACCAACTGCTTGGTCATCCTTCATGTTTGATTTCCATATCTTGCTGTTCCTTTTCCCTTCTGGTCTCTATTTTTGTTTCAAGCGCTTGTCTGATGCCACAATCTTTTTAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGGGTTATGGTTCGGTTGATTCTTGTTGCTACCCCTGCTGTGTGCCTCATTAGTGCTATTGCCGTTTCTGCCACAATAAAAAATTTAACACGGGTGGTGAGGGCCAAGAGCCCAGCTGTTCAAAGTGGATCTACTAAAGGAACTAGCACTGCAAAAAGTTCTTCTAAGGGTGTAGTTGACAACTCCCAGCCTTTCCAAAGGAATGGTGCAATTGTGTTACTCCTTGGTGCTTTCTATTTGCTGAGTAGATATGCTATTCACTGCACTTGGGTCACATCAGAGGCTTACTCATCTCCTTCAATTGTCTTGGCTGCGAGGGGTGCTCATGGCCAAAGGGTCATCTTTGATGATTATCGTGAAGCATACTTTTGGCTTCGACAGAACACTCCACCAGATGCCAAAGTGATGTCGTGGTGGGATTACGGTTATCAAATCACTGCCATGGGGAACAGAACTGTAATTGTTGACAATAACACCTGGAACAACACTCACATAGCTACTGTCGGGCGAGCAATGTCATCCTATGAGGATGAGGCTTATGAGATAATGAGATCGCTTGATGTGGACTATGTATTAGTCGTGTTTGGTGGTGTTACTGGTTATTCTTCAGATGATATTAATAAATTTCTTTGGATGGTGAGAATTGGTGGCGGAGTTTTCCCTGTGATAAAGGAACCTGATTACCTTGTGAATGGAGAATATCGAGTAGATAAAGGAGCTGCTCCGAAGATGTTGAACTGTCTCATGTACAAGCTATCCTATTATCGGTTTGGGGAGTTGACAACAGAATATGGAAAGCCACCTGGATATGATCGCGCTAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTGGAGTACTTGGAAGAGGCATTCACTACACAGAATTGGATAGTTCGTATTTATAAAGTGAAACCTCCTAAAAACAGATGGTAA 2172 0.489 MAQDLKPSISSFSLPKTLKLKTKQQELLIRVATLALIYVLAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTRNGFAEFWNWFDSESWYPLGRIIGGTLYPGLMLTAAAIHSLLRFLRLFVHIREVCVLTAPFFASNTTLVAYFFAKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALGSAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMASMGVFFLLQVFFFLDWVRHLLSDTKLFQSFLKITVTSAVAVGAVALGVGMASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPSGLYFCFKRLSDATIFLVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTRVVRAKSPAVQSGSTKGTSTAKSSSKGVVDNSQPFQRNGAIVLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01299 723 Pfam Oligosaccharyl transferase STT3 subunit 30 509 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vian8g01299 723 Gene3D - 526 676 - -
Vian8g01299 723 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 16 722 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vian8g01299 723 MobiDBLite consensus disorder prediction 452 471 - -
Vian8g01299 723 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 525 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01299 Vian-Chr8 31920641 31925717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01299 6 722 Miscellaneous Gene Families AT1G34130 86.370 0.0 1273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01299 K07151 - gmx:100816018 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01299 8 31920641 31925717 Vian8g01299 8 31920641 31925717 ECH