Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01297 ATGGCGTTCACTTACGCGGCTGCGATCGCTCCCTCTCTCCGCGGCATTGCTCGCATCGGTTTTTGTGACTACAAGGTTTCGCTAGCCGGTTCTCACAGCGAAGTGAATTCGGCGTCGTTTTGCGTTTCGTCGCGTGCGGGGAAGAACGATGTTTTGCTCGAGAGGAGGAAGTTGAAGTCGGCTGATACTCGCGTTGCCGACAATGCGCAGACGAAATTCAGCGTTGGAATTGAAATTCCTGTTTCGTGCTACCAGCTCATTGGTGTTCCTGATCGGGCAGAGAAAGATGAAATAGTTAAGGCAGTTATGGGTTTGAAAAATGCAGAAATTGATGAAGGTTACACAGTTGATGTTGTTGCAGCTCGTCAGGATCTTCTGATGGATGTTAGGGATAAGCTTCTTTTTGAGCCAGAATATGCTGGCAACCTGAGGGAAAAGATTCCCCCTAAGTCCTCACTTCGAATTCCATGGTCTTGGTTGCCTGGTGCTCTTTGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTAGAGATAGGACAGACAAATCTTCAGCACCAAAATGCCAAGCCATATACTGATGATATGATTCTTTCTATGGCGCTGGCTGAGTGTGCAGTTGCGAAGATTGGCTTTGAGAAGAAAAAAGTATCTCAAGGTTTCGAAGCTCTTGCTCGTGCCCAGTGTCTTCTAAGAAGTAAACCATCTCTTTCGAAAATGACACTGCTATATCAGATTGAAGAATCTCTTGAAGAGCTTGCGCCAGCTTGCACCTTGGAACTACTGAGCATGCCACAGGCTCCTGAACATGTTGATAGAAGACGAGGTGCAATTTCAGCTTTGCGTGAATTGCTCAGGCAGGGTCTTGATGTTGAAGCTTCATGCCAAGTACAGGACTGGCCTTCCTTTCTGTGCCAAGCATTTGACAGTTTGCTGGCTAAAGAGATTGTTGATCTTCTTCCTTGGGATAACTTAGCTGTGATGCGAAAGAATAAGAAGACGATTGAATCACAGAATCTAAAGGCAGTAATAGATTCTAATTGTTTTTATAGAGTTTTTAAAGCTCATATGGCAATTGGGTTTTCCAGCAAGCAGAAAGAGTTGATTAACAAAGCAAAAGGAATATGTGAATGTTTGATAGCTTCAGAGGGTATTGATCTGAAATTCGAGGAATCTTTTTGCTTATTCCTACTTGGTCAGTGCACGGAGGCTGAGGTGGTTGAAAAGCTTAAACAACTTGAGTTAAACTCAAATCCCAAAAATAATTCAGTCTTGGGGAAGGCAATAATGGATGCTTCTGCCGTAAACCCATCATTGGAAATTTGGCTGAAGGATTCAGTTCTTGCATTATTTCCGGATACTAAAGATTGTTCTCCAGCTTTGGGCCATTTCTTTAATGCTCAGCAGAAATTTTCTGGAAGCAAGAATTCTAAAGGAGGAGCTCAACAAATGTTGCCCACTATATGTCATAGACCTCTATCCTCATCTGGTTCCTTGGAACGAAGAGATGTTGAGGAATCTCGCTCATACATGAGCTCTTCTCCTACTGTAGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCGGAGTTCATTGCTATCAGGTAGAAATGAAAATGTAAGCAATCCTATAGAGCCACCAGTTCAAGTGAAAAGGAACCTTGGTAGTCATCGGAGTTCAGGAATTTGGCATGGTTACTTCCCTCAAGGACACATATTTGGAAGAATAACATACTTTACTGTATTGGGTTGTATTGCATTTGCTTCCATTAAGTTGTCAGGAATTGGCGTAAGCAAGACTCTTATTGGTTCTCATTCGGCTTTTACTAAAGCAAATGATAACATTAATTGGGCTGCAGATTCAGCTGACAACCCTGTAGGCCCAGCTTATATTAGGCAAAGTACTGTGGCCAACAAACTGAAGAGGATCCTTTTGATGTTTAAGATACATTTGTTGCAGCAACCAGGTGCTCGAAATCATGATTTACGTACGACCAGTACCTCGTCTTCTATTAATATTTCCAGAAGGCCAATGCCTGTGGAAGAAGCAGAAACCATTGTTAGGCAATGGCAAACAATCAAAGCTGAAGCTTTGGGACCTAGCCATGAAGTTAGTTCCCTAGCTCAAGTTCTTGACGAATCAATGCTTGCTCAGTGGAACGGTTTGGCCACTGCTGCAAAAGAAAGATCCTGTTACTGGAGATTTCTTTTGCTCAAGTTATCCATCATTCGAGCTGACATTCTATCAGATGGAAATGGAGCTGACATGGCAGAAATAGAAGCTCTCTTAGAGGAAGCAGCTGAACTCATTGACGGTTCTCGGCAAAAGAACCCTAACTATTATCTCTCTTACAAAGTCAAGTATGCTATGAAGAGGCAAGACGATGGATCATGGAAGTTCTGTGAAAATGATATAATAGAAACACCATGA 2433 0.4291 MAFTYAAAIAPSLRGIARIGFCDYKVSLAGSHSEVNSASFCVSSRAGKNDVLLERRKLKSADTRVADNAQTKFSVGIEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIDEGYTVDVVAARQDLLMDVRDKLLFEPEYAGNLREKIPPKSSLRIPWSWLPGALCLLQEVGESKLVLEIGQTNLQHQNAKPYTDDMILSMALAECAVAKIGFEKKKVSQGFEALARAQCLLRSKPSLSKMTLLYQIEESLEELAPACTLELLSMPQAPEHVDRRRGAISALRELLRQGLDVEASCQVQDWPSFLCQAFDSLLAKEIVDLLPWDNLAVMRKNKKTIESQNLKAVIDSNCFYRVFKAHMAIGFSSKQKELINKAKGICECLIASEGIDLKFEESFCLFLLGQCTEAEVVEKLKQLELNSNPKNNSVLGKAIMDASAVNPSLEIWLKDSVLALFPDTKDCSPALGHFFNAQQKFSGSKNSKGGAQQMLPTICHRPLSSSGSLERRDVEESRSYMSSSPTVGFAVKQLTPTDLRSSLLSGRNENVSNPIEPPVQVKRNLGSHRSSGIWHGYFPQGHIFGRITYFTVLGCIAFASIKLSGIGVSKTLIGSHSAFTKANDNINWAADSADNPVGPAYIRQSTVANKLKRILLMFKIHLLQQPGARNHDLRTTSTSSSINISRRPMPVEEAETIVRQWQTIKAEALGPSHEVSSLAQVLDESMLAQWNGLATAAKERSCYWRFLLLKLSIIRADILSDGNGADMAEIEALLEEAAELIDGSRQKNPNYYLSYKVKYAMKRQDDGSWKFCENDIIETP 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01297 810 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 30 808 IPR044685 -
Vian8g01297 810 Pfam ARC6-like, IMS domain 684 801 IPR025344 -
Vian8g01297 810 Coils Coil 757 777 - -
Vian8g01297 810 MobiDBLite consensus disorder prediction 490 511 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01297 - - gmx:100801086 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01297 8 31903651 31908975 Vian8g01297 8 31903651 31908975 ECH