Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01294 ATGGCGAGGAAGATGCCTTGTGCCCCTCAAGAGACAGGTAATGATAGTCCAAAAGTTTCAGAAGCAAGAAAGGATTCCGTATCAACAATATATCAAGAACAACATAAATTCACATCTTTAGAGGGTTGTCAAGAATCATCTCTTTCAAGGATTAACTTGGATAATAGGTGTGCCATCATTTCATTCAACTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCTTACCAGGGCAGTGTCTCAATTACATTAACTTAGCTGGTGGTGTAAATATGGATGGTGTGCAACTGCTTGTCTCTCCTCCGCTTAATAGGTTGAAGATTGATCAATGTAAGGGCCCTAGAGTGCCTCTTCCTTCCTATGCTTATTCAGCTAAAACAGGTACAAAAAAAGGCTTTACTAGTTCAAATGTGCATCGTCGATGTCAAAACAAGATTGCTAGCAGAGCTTCTAAACTCAACGAACTCTCTAACAAGTCCAGTTCTCAAAGTTCATTAGTATGCAGTCCTGGTTTGTTCCCAGATAGTTCTGCAGAAGTTAATTCATCTGATAAGTACGCAAGTAATTCCAAGGACGACGACAAGTCTTTGAAGAAAAACTCAAGAAAACATGGTAGAAAGAAATTTAGACAGAGTAAGAAGAAGTCAATTCACAGGTCTACCGAACGTGAAGTTCCTACTGAGGAAGTTGTCTGTCCAAGTTTGATTTCTGAAACCTGCAGCAGCAATGTTAGGGATAAGGAGGGCGTGGCAGAATTTTTAACTTCTGATGATAGATTAATAAAATCTGATTGTGACATAAATGAGATGAATGACATCAAAGTTATGGAAGCACCTAACGTTAGTAACTCTTATCTTGATCAGGAAGCAATGTTAAAGGATTCTGCACCTATTATTCCAAGTTCTGCAGGAGAATGTGCCACATTTGAATCCAAGAATCAGCTCAAAGGTAGGGGCCCTGAGGCAGTCATTGATAGAGAAATAAAGAACATCCAGCATACTCAGCCATGCAGTTTTAATGATATACAAGACTCTTTAGTGCTAGATTCAGTTTCAGTTTGTTCCAGAAGTGATGGGAGTATAAATACAGATGATATAGGAAAACAGTCCAACAAGTCAAATTGCACAACCACTTCAGATTCTGGAGATGGATATTTTTTTTGTCAAAACTTGACAAATGGCATTCCCAATAACTGTGAACATATTGAGGGGATTATGCACAGTGGTCAAAATTGCATTGGTAATGATAAGAGAGTTAAGCAAAAGAGAACTATGTCGCACAGTTCAGGTTTAAACAAATTTGGGGGTGTTGGAATTTTGCAAGGTCGAAAAGGGAAGGAAAACAGTCATTCTATATGGCAAAAGGTTCAGAAGAATAGTTCTGATGAATGTGGCGGTGATTTGAAGAAAGTAAGCACTACTTTGTCCCAACTTGCTTCTATTGGGGAAAAGGATCCCTCAGTTATCAAAGAATGTAAATCTGTTGGTGTGAACTGTGTATCAAAAACTGAGGATAAGAAACAAATGAAAAATAAAATTGGTAAGAAATCTAAAGTTAAAATGGACTCAGTATCAAAAAAGGGACAGAGCAATTATTCTAGGAAGAGTTTGCATCTTAGCAGGTCTTTGTCAAATGATCATGGGAAGGTTGGTGCTGAAAAGAATGATATGCTGCTTATCTCAACTCAGGAAATTGATCAGCATGGACTGAACCATGACTCTGGATTTAATTCTGATGTTCACTGCTTGTTGGATGGGGTCCAGACCAATGGGGTTGAACAGGTAACATCTGAAAAAATTCACAGTGCAGAATTTCATCTGGAGGTGTCAGATCCAAAAAGTAGTGCCTGCCATACTGTTGCAAACACAAACAATGAAAGTATAGATAGTGAGGATAGGTCGTTAGTAAGGCCAAGTGAGAATGTCAATCAATCAAATATGTCTGTAGAGCTGTCTCCAACGTCTTGCAATCTTGAAGGTGATGAGGTTGGTCAAACAGAGAAAGAAGTTTCTTCTGCAGACTACAATGCACAAAACCAGTGCTCTGGAACCTCCCTCTGGAAATGGATACCAATTGGGAAAAAAGATACTGGGTTGGAAAAATATGAATCTAGTATTTTACCACCAGACTATTCTGATGCATCCTCTAGGAACAATATTAACCATGAAAGCAGTGTTGAACCAGAAGTGGCCTCTTCTGAAAGTAAGGATTCTTCAATAAATGCAAGCAGAACATCAAATGGCGAGATTTACCACAATGTGTCCTGTCTAGGTGAGGGTGAGAACGAAAAATTGGGTGGGCAGGTTCCATTTACATTGACACAGCATAGGGACAAGCAAGAAGTTTCTAGTCACATGTTTAATGAAAGCAAAAAACAAGAAATGTTAGTAAATGATTCTTACAGAATATCCCAAGCTGTGAATGATGCATGTAGGGCACAACTAGCTTCTGAAGCAGTGTACATGGCTACAGGTGGTCCAGTTGCAGAATTTGAAAGACTACTTCATTTTGGTAGTCCTGTGATTTGTAAATCAGTTGATTCAGTCAGTTGTTCAACCTGCTCATGCAACCATGCTGGTGGTGTCTCACTGTGCAGACACGAGATCCCTAACCTATCTTTGGGATGCCTGTGGCAGTGGTATGAAAAACATGGGAGCTATGGATTAGAGATAAGTGCTCAGGATCATGAGAATCCAAAGAGTCAAGGTGTTGGTGATTTTCCATTCCGTGCGTATTTTGTCCCTTCTTTATCTGCAGTTCAGCTGTTTAAGAACCATGAAAATCAATGTGTAAATAGCAGTGACGAGCTTTCAAATTGTGAGGTTTCAGAGGCATGTCAAATGATTAATTTTTCAGAAAACTCATCTACTGCCACTGAACATTCAATATTTTCTGTTCTCTTTCCTCAGCCTCGAAATCAGGATGCAAGCATTGAAACTCTGAAGGAGACAGATTCTATCAGTAATGGATCTGGTGATTTAGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGACAGCCTCTTTATGAGAAGATACAAGAACTGGTTAGAGGAAATATGCCAATCCAATCTTCAACATATGGGGACCCAACAAAACTGGATTCAATAAAGCTGCGAGATCTTCACCCTAGCTCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGTGCATCTTTTCTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGAACAGGTTCAGATTTGTTCACATCAGGTTCTTGCATAGTATCTCCAGCTGTGGGTCTCCAAAGCTACAATGACCAGGGAGAATGCTGGTTCAAGCTGAAGCACTCTGCAGAAGCAGCAGAAATGGTGGGCTTAGACCCTTCTTTTGTCCTGAGAGAACGTTTGGAGACACTTGAGGAAACAGCATCTGTAATGGCAAGAGCTGTGGTGAAGAAGGGGAACCAAACATGTACTAACAGACATCCTGATTATGAGTTTTTCTCGTCTAGGCGACGGTATTGA 3525 0.3989 MARKMPCAPQETGNDSPKVSEARKDSVSTIYQEQHKFTSLEGCQESSLSRINLDNRCAIISFNFEPDGTWRIVALPGQCLNYINLAGGVNMDGVQLLVSPPLNRLKIDQCKGPRVPLPSYAYSAKTGTKKGFTSSNVHRRCQNKIASRASKLNELSNKSSSQSSLVCSPGLFPDSSAEVNSSDKYASNSKDDDKSLKKNSRKHGRKKFRQSKKKSIHRSTEREVPTEEVVCPSLISETCSSNVRDKEGVAEFLTSDDRLIKSDCDINEMNDIKVMEAPNVSNSYLDQEAMLKDSAPIIPSSAGECATFESKNQLKGRGPEAVIDREIKNIQHTQPCSFNDIQDSLVLDSVSVCSRSDGSINTDDIGKQSNKSNCTTTSDSGDGYFFCQNLTNGIPNNCEHIEGIMHSGQNCIGNDKRVKQKRTMSHSSGLNKFGGVGILQGRKGKENSHSIWQKVQKNSSDECGGDLKKVSTTLSQLASIGEKDPSVIKECKSVGVNCVSKTEDKKQMKNKIGKKSKVKMDSVSKKGQSNYSRKSLHLSRSLSNDHGKVGAEKNDMLLISTQEIDQHGLNHDSGFNSDVHCLLDGVQTNGVEQVTSEKIHSAEFHLEVSDPKSSACHTVANTNNESIDSEDRSLVRPSENVNQSNMSVELSPTSCNLEGDEVGQTEKEVSSADYNAQNQCSGTSLWKWIPIGKKDTGLEKYESSILPPDYSDASSRNNINHESSVEPEVASSESKDSSINASRTSNGEIYHNVSCLGEGENEKLGGQVPFTLTQHRDKQEVSSHMFNESKKQEMLVNDSYRISQAVNDACRAQLASEAVYMATGGPVAEFERLLHFGSPVICKSVDSVSCSTCSCNHAGGVSLCRHEIPNLSLGCLWQWYEKHGSYGLEISAQDHENPKSQGVGDFPFRAYFVPSLSAVQLFKNHENQCVNSSDELSNCEVSEACQMINFSENSSTATEHSIFSVLFPQPRNQDASIETLKETDSISNGSGDLELLFEYFEFEQPQQRQPLYEKIQELVRGNMPIQSSTYGDPTKLDSIKLRDLHPSSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTGSDLFTSGSCIVSPAVGLQSYNDQGECWFKLKHSAEAAEMVGLDPSFVLRERLETLEETASVMARAVVKKGNQTCTNRHPDYEFFSSRRRY 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01294 1174 MobiDBLite consensus disorder prediction 177 226 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 638 659 - -
Vian8g01294 1174 Pfam Protein of unknown function (DUF789) 828 1168 IPR008507 -
Vian8g01294 1174 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 11 1173 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 708 743 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 504 548 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 504 522 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 199 215 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 523 538 - -
Vian8g01294 1174 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01294 Vian-Chr8 31827330 31834113 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01294 - - gmx:100798960 1574.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01294 8 31827330 31834113 Vian8g01294 8 31827330 31834113 ECH