Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01202 ATGAAGCCTTCTGTGCTGGGTTTGTCACTTCTTGTTGTTCCTCTGCTTCTCTCCCTCTTCTTTGTTGCACTCGTGCCTAAGGAAACCGCCATGAAAACCTATGAGGTGTTTGGAGTGAAGATAGAGAAGAACCCACCTCAGTCCAAACTCACTGAACTTGGAGTCTCAACTTGGAACAAGTGGGAAGGTGGTCCAACCAAAATTCCATGGTACTTTAAAGAAGAAGAGACTATGTATCTGCTGGAGGGAAAAGTGAGAGTTACTGTTGAAGGATCTGTTGGGTCTTTTGAAATTGGGGGTGGTGATTTAGTTGTCTTCCCAAAAGGAATGAACATTACTTGGGAAGTGATTGAAGCTGTGAAGAAGCACTACAGCTTGAAAAAGTAA 387 0.4341 MKPSVLGLSLLVVPLLLSLFFVALVPKETAMKTYEVFGVKIEKNPPQSKLTELGVSTWNKWEGGPTKIPWYFKEEETMYLLEGKVRVTVEGSVGSFEIGGGDLVVFPKGMNITWEVIEAVKKHYSLKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01202 128 Gene3D Jelly Rolls 27 126 IPR014710 -
Vian8g01202 128 PANTHER OS04G0445200 PROTEIN 31 127 - -
Vian8g01202 128 Pfam EutQ-like cupin domain 51 124 IPR008579 -
Vian8g01202 128 CDD cupin_TM1112-like 57 126 - -
Vian8g01202 128 SUPERFAMILY RmlC-like cupins 46 124 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01202 Vian-Chr8 30703952 30705805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01202 K06995 - gmx:100807654 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01202 8 30703952 30705805 Vian8g01202 8 30703952 30705805 ECH