Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01194 ATGCAGTGGAAGATGACAGCGACAAGGCTGATTAGTGGTGACATGTGTGCTTTTGATTCTACAGTAGCAAGGATGGGAAACACGTTCTGTTTCTTCTGTGGATGCGTTGCTCAATCGAGCGTCGGCGTCGTCGAACAGTGGGGTCGCTTCCACCGCCTCGCGCAACCCGGTTGCCACTTTTTCAACCCTCTCGCCGGCGAATGCCTCGCCGGAATCCTCTCCACCAGAATCTCCTCCCTCGACGTCCGCATCGAGACCAAAACCAAGGACAATGTGTTTGTGCAGTTGCTGTGTTCAATTCAGTACCGAGTGATTAAGGAAAACGCGGATGATGCTTTCTATGAATTGCAGAATCCTCAGGAGCAGATCCAGGCTTATGTTTTCGATGTGACACGTGCTATTGTTCCGAGAATGAACTTGGATGAGCTCTTTGAGCAGAAGGGCGAGGTTGCTAGAGCTGTCTTGGAGGAACTTGAAAAGGTGATGGGAGAGTATGGGTATAATATAGAGCACATTCTCATGGTTGATATTATACCCGATCCTTCTGTGCGTAAGGCAATGAATGAGATCAATGCAGCTCAAAGGATGCAACTTGCAAGTGAGTACAAAGGAGAAGCTGAAAAGATATTGCTAGTTAAAAAGGCAGAAGCTGAAGCTGAGGCCAAGTATTTGGGTGGGGTTGGTGTGGCTAGGCAACGGCAAGCTATTACAGATGGCTTGAGAGAGAACATCCTGAATTTCTCTCACAAAGTAGAAGGCACTAATGCTAAGGAGGTGATGGATCTTATCATGATAACTCAGTACTTTGACACAATCAAAGACCTTGGGAATTCATCAAAGAATACCACTGTTTTTATACCCCACGGACCTGGCCATGTTAGGGATATTGGAGAGCAGATACGCAACGGACTGATGGAAGCAGCCAGTGCTCAAGTAAATGTGGAGGAGTGA 951 0.4732 MQWKMTATRLISGDMCAFDSTVARMGNTFCFFCGCVAQSSVGVVEQWGRFHRLAQPGCHFFNPLAGECLAGILSTRISSLDVRIETKTKDNVFVQLLCSIQYRVIKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDELFEQKGEVARAVLEELEKVMGEYGYNIEHILMVDIIPDPSVRKAMNEINAAQRMQLASEYKGEAEKILLVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTNAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMEAASAQVNVEE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01194 316 CDD SPFH_like_u4 35 304 - -
Vian8g01194 316 SMART PHB_4 31 191 IPR001107 -
Vian8g01194 316 Gene3D Band 7 domain 70 193 IPR036013 -
Vian8g01194 316 Pfam SPFH domain / Band 7 family 38 207 IPR001107 -
Vian8g01194 316 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Vian8g01194 316 SUPERFAMILY Band 7/SPFH domain 72 196 IPR036013 -
Vian8g01194 316 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 25 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01194 Vian-Chr8 30604402 30608790 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01194 - - gmx:100804986 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01194 8 30604402 30608790 Vian8g01194 8 30604402 30608790 ECH