Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01177 ATGGAGTCTGTTCTAAGCCAGGTTGGTGTAAGTTTTTTCAATGGGATTACCCCAAAAGGGGTTGTTAGTACCCATTTCAAGGGTTGTTCTTTTGGTGTTGGTGGTGGTGGGAAACCAAGGCGTGTAGTGTTGGTGAAAGCTGAGGCTGTGGGTATAAACCCTGATATCAGGAAGAGTGAAGAGAAGGTGGTGGATTCTGTTGTGGTCACTGAACTCTCTAAGCCCGTCACTGCTTATTGCAGATGTTGGAGATCAGGGACTTTTCCTCTATGTGATGGAAGCCATGTTAAGCATAACAAAGCCACTGGTGATAATGTTGGACCTCTTCTTTTGAAGAAGTAA 342 0.4474 MESVLSQVGVSFFNGITPKGVVSTHFKGCSFGVGGGGKPRRVVLVKAEAVGINPDIRKSEEKVVDSVVVTELSKPVTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01177 113 Gene3D - 68 113 IPR042216 -
Vian8g01177 113 FunFam CDGSH iron-sulfur domain-containing protein 1 68 113 - -
Vian8g01177 113 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 46 113 IPR045131 GO:0010506|GO:0051537
Vian8g01177 113 SMART znf_cdgsh 62 101 IPR018967 GO:0043231|GO:0051537
Vian8g01177 113 Pfam Iron-binding zinc finger CDGSH type 67 95 IPR018967 GO:0043231|GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01177 K23882 - gmx:100783951 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01177 8 30325848 30329079 Vian8g01177 8 30325848 30329079 ECH