Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01142 ATGTGTTATTCTGGTTCTGTTTTGGCCACCCACACAACACCACCACATTCTCCCAACTCGCTCCGAGTTGACTCACTCTTTCCCTTTCAAGATCAACAGCCGCCAACCCAGCCTCCGCGCTCCACTGTCACTGCAACCACCGCCACCTTTCTACGTCAATGCAAAACTCCTCGTCGATTCTCTCCGGAACCTTCTCCTCCTCTTCCTTCCCCTCCGGCCTTTGACTTTTGCTTTCGAGCGAATCCGATGAGTCCCTTTCGATCTCTTCTGCTCTCCGTCGTCGTATTCTTACTCCTCTGCCCCCTCGACGCCACCGAGGGCGACGCCGATCCACTATACATGTATAGTAAAAATTGGAACTTGGATTTTCTGTCGTTTTTCTGTCGTTTTTCTGTTAAGAAGGGGAATACCAACCGGACACCGAAAAATGGGGGGTGTATGGGTGAAGAGAATAAAGAAGATTTGTCTGACTGTAGGATTTTCGGGTTTTGCATAGATGCATTGAATGATGAAGATGCACTTCCTTTACTTGGTTTGTTGTCATTTGTCAAGCATGGAGGAGATTGTGTGGAGCTGTGTAAGAAAACTGGATGTGTAGGGGATAGATGCTTTCAACATTGTAAATTCTCATCAGATGGAAAACCAATTGATGGTCCATGGTATATGCATGAACCCCTCTACCTGAGGTGGAAACAATGGGACTGTTGCACTGACTGTAGCTATTACTGTATGCTAGCTAGAGAGGAAGAAAGAACAAAACTTGGTGACAAGCCCGTCAAGTATCATGGAAAATGGCCATTCAGGCGTGTTTATGGAATTCAGGAACCTGTTGCTGTTGCTTTGTCTGCTGTCAATCTTGCCGTTCAATTTCATGGTTGGGTATCCTTTTTCATTCTTGTGTACTATAAGTTGCCTTTGAGGCCAGATAAGAAGACTTACTATGAGTACACTGGATTGTGGCATATTTATGGGATTCTATCCATGAATTCATGGTTGTGGAGTGCTGTTTTTCATAGTAGAGCCGTGGAATTAACAGAGAAGTTGGATCTTTCTTCCGCTGTGGCCTTACTTGGATTCTCTCTAATTCTAACAATACTGCGATGTTTTAACGTGAGGGATGAGGCTACACGAGTCATGATTTCTGCTCCATTGCTTGCTTTTGTGACAACTCATATCATGTATCTGAATTTCTATGAGCTTGCTTATGGTTTGAACAGGATAGTTTGTATGGGAATGGTTGTTGTCCAGCTTCTTATTTGGGCCATTTGGGCCGGCGCTTCAAACCATCTGGCACGATGGAAGTTGTGGACAGTGGTGGTTGGAGGTGGCTTGGCTATGGTGTTGGAAACATATGACTTCCCACCTTACATGGGATATGTGGATGCTCATGCTCTATGGCATGCAACAAGCATTCCTCTCACATTTCTTTGGTGGAGTTTTGTGAGGGATGATGCTGAGTTTAGAACCTCAGCTATGCTTAAGAAGGTAAAATAG 1494 0.4485 MCYSGSVLATHTTPPHSPNSLRVDSLFPFQDQQPPTQPPRSTVTATTATFLRQCKTPRRFSPEPSPPLPSPPAFDFCFRANPMSPFRSLLLSVVVFLLLCPLDATEGDADPLYMYSKNWNLDFLSFFCRFSVKKGNTNRTPKNGGCMGEENKEDLSDCRIFGFCIDALNDEDALPLLGLLSFVKHGGDCVELCKKTGCVGDRCFQHCKFSSDGKPIDGPWYMHEPLYLRWKQWDCCTDCSYYCMLAREEERTKLGDKPVKYHGKWPFRRVYGIQEPVAVALSAVNLAVQFHGWVSFFILVYYKLPLRPDKKTYYEYTGLWHIYGILSMNSWLWSAVFHSRAVELTEKLDLSSAVALLGFSLILTILRCFNVRDEATRVMISAPLLAFVTTHIMYLNFYELAYGLNRIVCMGMVVVQLLIWAIWAGASNHLARWKLWTVVVGGGLAMVLETYDFPPYMGYVDAHALWHATSIPLTFLWWSFVRDDAEFRTSAMLKKVK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01142 497 PANTHER PER1-RELATED 188 492 IPR007217 GO:0006506
Vian8g01142 497 MobiDBLite consensus disorder prediction 1 20 - -
Vian8g01142 497 Pfam Per1-like family 225 485 IPR007217 GO:0006506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01142 Vian-Chr8 29763463 29768626 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01142 K23553 - gmx:100793147 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01142 8 29763463 29768626 Vian8g01142 8 29763463 29768626 ECH