Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01088 ATGCGAACTCGCTTTCTCAACAAAGACTACTTCGCTCTTCCTCCATCACAAACCATTCCTTTCCTCTACCTTCCTGTCCCTCGTCTCCCTCCGACAGCGCCCTCCTCCGTCCATCACCACCTCCGCTTTGATCCTCCCCTCAATCTCTCCCTCCACCTTGAACCCTTCCCCGTACAAGCTGCGCTAACTGCCTTCCTCGCTGCTGTCCTCCCACACCGAATCCGCATCCACTCTCGAGATCTCGCTGCTTTTGATCCCGCGGAAAGTAAAACTATTGTGCTCGGTGATAAGAACGATGTTGTTTATGAGACGATCCAATTTGAGACACCTGAGCTTGACGTGTTCCTGGAAAATATATGTGTCACTGAGTCGGAGAGGATGCAAATGCTGTCTCAAACTCCAGAAGTTGAAAATAGCCCGGAAATGCTCAAGAAGCCTGAACCATCAAAGCAGTACCCTTACGAGGCTCTGGAATCAGTATCTTTTGTTGAAGATGTGATTTCGGAGTACCTGATGGGGGAAAAGGCATATTCTCTAGAAGATCATATTTCTGTTCAGCAACTGCCTCGCTCTGACCAAAACATATTTCTTATTTTGGAAGTGGACGAGGGAGGTTTGGTAATTCCCACTGGCATATCTTTGGTAGGAGTAGTTGACTCGTATTTTGAAAATATCAAATCTCAACATTTTGATGAGCAATGTCAATCCATAGCAGAGGGCAAGGAACTTCTGGGTTCTATAAAGCATAGCATGATGGAATTTTTCTCAGATGAATGTGAATCAAGGAAGAGCCTTGAGTTATCAGATATGTTTCCCGAAAGCGATTTTATGAATATACTGGAAACTGAACATGTTAATGGGAGTACTGGCCTGCAGAGGACATCACATACTAATAGTGACTTGTTAGATAATCTTGTTACCTTCCAGGAGTTTGAGTTCCTTGATGAAGACCTAATGCAGGCCTTTGAAGCTTTCTACAAAACAAAAACTCCGGATGATCTAATAACAAAGGACTGTATGTTTAAGAAAGAGTTTAATTTCAAGAGTTTTGATGAATTGATTGTTAGCAATGAGATAGCGCTAACAGATAACACATTTAAATCACTGCCTGTACCTGTTATCTCTGATCAACAAAGGATGATAAATCTACATGACATTATTGGAGAACAAATTTCCAGCTTGAAGACCCGACCCCTCTCTGCATCTGATGGAATTTACCTAAACTGGGATCTACTTGAAGAAGATAGGTGCAATCGCAAGATTTCAAACTGGTATCAGGACATATTGGCCAAGATTGATCTGAACTACGAAGATTTTGTAGGTAAACCTTTTGATTATGGAAAATTGGTATTCGGTCTACTTTTCTGTGATGATACCAAAAGTGAATGTGAAACTAAACAAGATGAAGAGTTGCAGAAGATGCTTTCTGATTGCATGCCTCTCATTGACAATCATCCTGTAGAATTTGCTTCGGGAAAAATATTAGAACATGTATCTTTTAAACAAGGAAGTGGAGAACAATTACCTGAAAAAACGGCTGAGAGGGCTTCATTTTTATTTAAATCTATGTCAGAAATCAGCAATCTTGATTATTTCTTGAACCCTCAGAAAATGACTGGTGAGGGGAATTATAATTATGCAGTAGAGTCCAATAATACTAATGTTAGTATTCCAAAAGTTTCATCCACTGAATTGAAGGTCGATACACAGACACTGGGGTCCCATACTGTTCTGCATAGAGTTAAGTTGTCCGATAATATTGTGGCTCTGGCTGGATATTTTAAAGAAAGCTATCTAGCCATTTTGCACAGAGATACAGAAATGACAAAAACACATAAATCAAATGTAGATTATTTTAAATTTCTCAGTCTTCAAAGGCAGAAGCTGTTTGAATACCATGCAAATGGAAACAATATGGCCTTTATTGTATTATGTGCTATCAAACAGGCTGCTTGGTACTTGTGCTTCTATGGTCTCCATCCAGCATTCTTGTATTTAGACAAGTTATGTCAAAACTTAGACTATTTGAAATCAAGGTTAGGCATCCTCAAATCTTTGATCGAAGATGAAAAGAGGAAGGTGGACAACAATGTTACTTTGGCACACCCATCATTAACAATTGTGAAGGAAATTTTCCAGTCATACATCAAACGGGATAGTTTGAAAACTTTGATTGTGGCTGAAGAAGTATTCTGGTCCTCATTGAAAACTCTTCTCATTTCCCTGGGGTTATCATTCAGTGAACAAAATGGTCCTACAAGAAATCATCCATACGCCAATACTGGGCCTGAGGGCACAGATACTAAAATGAAAGAACTCATGATTTCTGACTGCTTGTTGGTTTCACACAGGCATGTTTCTACGTTGTTTCTACTCAACAAATTTGACATTATCTTGGAATATGGAGGTTCATACGCCTCATCTAGGATATCTGACATTTCCAAAAACTTGGTTGGATTGCCTCATCTTCACTTTTTGACGGTTGAATTTGATGGTCATGCCGCTCTCAAAGCACTCTGCGAAGGTGTTGAATTGCACCCAAACACTGAAATGTTATTGGAAAGTGAGACTCGTCCTATTTTCAATCATAAGGAAAGTATGATGAATCAGAACGTGGAAAGACTACTGAATTTTTGTCCTGTGGAGCAAAGCTATGACAAAATATCTTCAAATGTTGCACCTGAAGTAGATCATATTGTGCCACTAATTTCTGCTTTGAAAACCGAAAAAGGTCTTAAGAACATGGAGGCTCTCCCTGGAACAGTTATCATTGTAAATACTCAAAATGTAGATAAGGAAATGATAATGTCTAGAAGAAGCTCTTACCAAGTGATTCTGGCAATGGAGAAAGAAGGAATTCAAGTCGTTGAACGTGATTTAAATTTGCCCGCTGATATAATATTAAGTTCTGCTGTTTGCTTGGCATGGTATGATAGTGAAAACCTTGGGAAGAAAGCAACTCCAACAACTGAAGCATCCTCAAGCTTGCCTTTATGTGTTGAGAATATTGCCACAGATGTCCTAACCTTGCTTAGTTTTTACTTCCATGGCTGCTTTCTGGTCTTTGAAGGAGAATTTAACTTCCTTTCAACTGTAATGGAATCCTCTGATGGACTTTATGCTGCAGCAACAAGCCTGGGAATTGATTTGCAGATATTCTTCTCATACTCGCCTGAATTGACAAATGAAGTTATTGTAAGCTGCATTAAGACTGCTACGAATACGACAAGGGGTCTGTATCCTAAAATGCCTGACTCGGTAACTCTTGCCGAGTCTTTTCTTACGGAATTTCCTGGAATAAATCCTTTAACGGCACACTCTATACTATCTTCAGGGGTCATGCTTAATGAGTTTCTTGCGTGGTCACATGAGCAAAGGATGCATGTTTTAGAAAAGTATCACGTTCCAGAAGAAAGTATCTCTCTTTTCAGTGTTTTCTGCAGATATGGGGAACGGGAGGATTCAAAATCCATAATGACAGATTGCTCCTCTTCGGTATCTTCTGGTCTGGACTCAGATAGGTGTTGTTTATATCAAGTTCAAAATGAAAGAAAAAGAAAACATTCTATAAGTAGTCATCATATGGATGAACTGCGTTGTGATGAGTTGACGCAATTCGAGACACTACATCCAGCAGTTAAGGCTGCCCCTGATTCCTCTACCTTGCCAAAACTTTTCAATTTTGGTATTCCAAAAAATGATGAGAGATCCAGTGAGTTTGCAAAGACAAGTTTATCCATGAGTGAGTTTTTTGATCAAAAGCAGAGCATCAACGCGGCTACGATGCGAATCCGTTCTGGAGTCTCCTATTCACCAGGGAACTGCAAAGCTCCCCCAAAATTAGAGCAACTGAGACAACCCGGTTTATCTTTGAAAAATAAAGACTTGGCTCAAAATGAAATACTGGATATTGATTTGATGGGAAAAAGTGTGAATTGGAATAGCCTTAGTAATTCTGAGAAGCTGCATGAAGATGTTAGAGGCGAGGTGGTCGACTTGACAGACAGCCCCTTATTTGATAAAAGCTTTGACATTCCTGATTCCGTGTACTTCACAAATTTGATAACAGAAACAGAGAAAGATCCTATGAGAAAGAATAAAATTGCAAGGACATTGTCATTTAATAATTGTAGTCACCCAGAAACCAACTCATCGAAAATATGGAGATCTTTAAAAGATACACAAGGAGATGTAGACGAATTCCACGAACCAGATTTTGGAGAAAATGTTTTTCCTCTTGATTTGAAGTCTCATGGAAATATCGGTTTAACTCAGGCATCAGTGAGAAATTTAGAAGAATCACCATTCAAGGAAGAACTGTCGCATTTGAGTGAAACTCCACTCTCATTTGCACGCCGATCCGCTAGTCTATTAAAGAATTCACCCTGGACAACTGAATTTATCAATAAAGTAAAGGAAAAGAGCAAATTGCGTCAAAAATCATTATCATCTGAGAGTTCTGGCCCTTATTTTGGGTATCCTGGGAACATGTCCAAAGCTTTTAAGAGAAGAAGTCCTTCTACAATTGATTTTTTTAAGTACCAACCTGGCAGAATATCTGGAAATGTTCCGCAACAGAAAAGACAGAAACAATCAGGACTCTCTTCAAACTCAACCAAGAAAGGAAGATATTCTACTTCCTCATCCTCATGGACTCCAAAAGATAAGCGATCAACAAAGTTGAAGCCAATGGTTTCCCGTGATGAAAATGGAGTTCGGGATAAGAATAGGGAGTTAGATACCGTACTGGATAATCTATGTTTGGAGCGAATGGAGATATCATATGATGATCGATGTACGATCTAA 4806 0.3937 MRTRFLNKDYFALPPSQTIPFLYLPVPRLPPTAPSSVHHHLRFDPPLNLSLHLEPFPVQAALTAFLAAVLPHRIRIHSRDLAAFDPAESKTIVLGDKNDVVYETIQFETPELDVFLENICVTESERMQMLSQTPEVENSPEMLKKPEPSKQYPYEALESVSFVEDVISEYLMGEKAYSLEDHISVQQLPRSDQNIFLILEVDEGGLVIPTGISLVGVVDSYFENIKSQHFDEQCQSIAEGKELLGSIKHSMMEFFSDECESRKSLELSDMFPESDFMNILETEHVNGSTGLQRTSHTNSDLLDNLVTFQEFEFLDEDLMQAFEAFYKTKTPDDLITKDCMFKKEFNFKSFDELIVSNEIALTDNTFKSLPVPVISDQQRMINLHDIIGEQISSLKTRPLSASDGIYLNWDLLEEDRCNRKISNWYQDILAKIDLNYEDFVGKPFDYGKLVFGLLFCDDTKSECETKQDEELQKMLSDCMPLIDNHPVEFASGKILEHVSFKQGSGEQLPEKTAERASFLFKSMSEISNLDYFLNPQKMTGEGNYNYAVESNNTNVSIPKVSSTELKVDTQTLGSHTVLHRVKLSDNIVALAGYFKESYLAILHRDTEMTKTHKSNVDYFKFLSLQRQKLFEYHANGNNMAFIVLCAIKQAAWYLCFYGLHPAFLYLDKLCQNLDYLKSRLGILKSLIEDEKRKVDNNVTLAHPSLTIVKEIFQSYIKRDSLKTLIVAEEVFWSSLKTLLISLGLSFSEQNGPTRNHPYANTGPEGTDTKMKELMISDCLLVSHRHVSTLFLLNKFDIILEYGGSYASSRISDISKNLVGLPHLHFLTVEFDGHAALKALCEGVELHPNTEMLLESETRPIFNHKESMMNQNVERLLNFCPVEQSYDKISSNVAPEVDHIVPLISALKTEKGLKNMEALPGTVIIVNTQNVDKEMIMSRRSSYQVILAMEKEGIQVVERDLNLPADIILSSAVCLAWYDSENLGKKATPTTEASSSLPLCVENIATDVLTLLSFYFHGCFLVFEGEFNFLSTVMESSDGLYAAATSLGIDLQIFFSYSPELTNEVIVSCIKTATNTTRGLYPKMPDSVTLAESFLTEFPGINPLTAHSILSSGVMLNEFLAWSHEQRMHVLEKYHVPEESISLFSVFCRYGEREDSKSIMTDCSSSVSSGLDSDRCCLYQVQNERKRKHSISSHHMDELRCDELTQFETLHPAVKAAPDSSTLPKLFNFGIPKNDERSSEFAKTSLSMSEFFDQKQSINAATMRIRSGVSYSPGNCKAPPKLEQLRQPGLSLKNKDLAQNEILDIDLMGKSVNWNSLSNSEKLHEDVRGEVVDLTDSPLFDKSFDIPDSVYFTNLITETEKDPMRKNKIARTLSFNNCSHPETNSSKIWRSLKDTQGDVDEFHEPDFGENVFPLDLKSHGNIGLTQASVRNLEESPFKEELSHLSETPLSFARRSASLLKNSPWTTEFINKVKEKSKLRQKSLSSESSGPYFGYPGNMSKAFKRRSPSTIDFFKYQPGRISGNVPQQKRQKQSGLSSNSTKKGRYSTSSSSWTPKDKRSTKLKPMVSRDENGVRDKNRELDTVLDNLCLERMEISYDDRCTI 1601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01088 1601 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 1560 IPR038824 GO:0007131
Vian8g01088 1601 MobiDBLite consensus disorder prediction 1555 1573 - -
Vian8g01088 1601 MobiDBLite consensus disorder prediction 1519 1554 - -
Vian8g01088 1601 MobiDBLite consensus disorder prediction 1513 1573 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01088 - - vum:124822140 2791.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01088 8 28708987 28717547 Vian8g01088 8 28708987 28717547 ECH