Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01079 ATGTCTAATATGATAGAGGTGAGAGTTCCAAATCTTGATTGTGAAGGATGTGCTTCAAAACTAAAGAAAGCTCTCTTCAAACTTAAAGGAGTAGATGAGGTAGAAGTTGAAATGGAATCACAGAAAATAACAGTGAGGGGCTATGGCTTGGAGGAAAAGAAGGTTTTGAAGGCAATCAAACGTGCAGGGAAAGTGGCAGAACCATGGCCATTTCCAGGGCATGCTCATTTTTCTTCATTTTACAAGTATCCCAGTTACATTGTTAACCATTACTATGATGCATACAAAAGTGAAGCTACCAATGGTGTTCACAGTTTCTTCCATACCCCTGCAGTGTATTCAGTTGCTGTGGCATCTGATGAAGCATTTGCTTCTCTCTTCAGTGATGATAACCCTCATGCTTGCACCATAATGTAA 417 0.4005 MSNMIEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMESQKITVRGYGLEEKKVLKAIKRAGKVAEPWPFPGHAHFSSFYKYPSYIVNHYYDAYKSEATNGVHSFFHTPAVYSVAVASDEAFASLFSDDNPHACTIM 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01079 138 CDD HMA 6 67 IPR006121 GO:0046872
Vian8g01079 138 Gene3D - 2 66 - -
Vian8g01079 138 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 5 135 IPR045181 GO:0046872
Vian8g01079 138 ProSiteProfiles Heavy-metal-associated domain profile. 3 67 IPR006121 GO:0046872
Vian8g01079 138 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
Vian8g01079 138 SUPERFAMILY HMA, heavy metal-associated domain 4 69 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01079 Vian-Chr8 28497380 28499080 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01079 - - gmx:100802676 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01079 8 28497380 28499080 Vian8g01079 8 28497380 28499080 ECH