Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01077 ATGCAAGAGGACAGTGGATCGGGGCTTTTTCGTCATTCAAGTAAGGATGGAATCTGGTTGCCGGTCATAAAAGCTCTGCCGCGATCCGTGGTGGTTCTCCTCTTCCCCGTCGTGGTCATCATCGGCGTGTTGGCTTACACGCGCGTGATTGACACACCACCTACACTTTCTGGAATTTCATCTACCAAATCTTCATTAAGCACCACACGTACCTTCAAAATCCCTTTCAGTGTTCAAAGAGAGACTCCATTGAACTGCAATGTATACAACCTCACAAGAACATGCCCCACCAATCAAAACCCAATCAAAGAGGATGATCAGAGCCGTCCATCCGGTGCCACGTGTCCACAGTTCTTCCGTTGGATCGAGGAGGACCTGAGACCGTGGGCCTACACAGGCATAACACAAGAGATGGTGGAGAGGGCAAAGGCAACAGCAAACTTCAAGTTGGTGATATTGAAGGGTAGGGCTTATTTGGAGACCTACCAAAAGTCCTTCCAAACAAGGGATGTCTTTACATTATGGGGCATTTTGCAGTTGTTAAGGAGGTACCCTGGAAAAGTTCCTGATTTGGAACTCATGTTTGATTGTGTGGATTGGCCTGTGGTTTTGGCTAATCAGTACAGTGGTCCTGTTCCTCAGCAGCCACCACCATTGTTTCGATACTGTGGAAATGATAATACCTTGGACATTGTCTTCCCTGATTGGTCTTTCTGGGGATGGGCTGAGGTTAATATAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAAGGGAACGAGAGAATACCATGGCTCAACAGAGAGCCTTATGCATACTGGAAAGGTAATCCATCTGTTGCAGAAACCAGAGAAGACCTCATGAAATGCAATGTTTCTCAAAATCAAGATTGGAATGCTCGTTTATATGCTCAGGATTGGAAACGAGAATCAGAAGAAGGGTTTAAGAAATCAGAATTGGCAAGCCAATGCACTCATAGATACAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATATATCCTGGCATGTGACTCCACCACTCTACTTGTGAAGCCACATTACTATGATTTTTTCACAAGAGGACTCATACCAGGGCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTAGATTGGGGGAACAGTCACAATCAAAGGGCACATCAAATTGGAAAGGCAGCAAGTGAATTCATTCAAGAAGAGTTGAAGATGGATTTTGTGTATGATTACATGTTTCATCTTCTGAATGCATATGCTAAACTGTTCACATACAAACCCTCCATTAGTGGTAATGCTACTGAGCTGTGTGTGGAGTCAATGGTATGTGGAGCAGAAGGGTTGGAAAAGAAATTTATGATGGAATCATTGGTGAAGGGTCCAGCAGACACCGACCCTTGCACCATGCCTGCCCCTTTTGATCCTCCATCTTTGTACGAACAATTACACAGAAAGAAAAGTTCAATTCAACTAGTTGAATCATGGGAGAGAAGTTACTGGGAGAATCAAAACATAACATCTTAG 1554 0.4421 MQEDSGSGLFRHSSKDGIWLPVIKALPRSVVVLLFPVVVIIGVLAYTRVIDTPPTLSGISSTKSSLSTTRTFKIPFSVQRETPLNCNVYNLTRTCPTNQNPIKEDDQSRPSGATCPQFFRWIEEDLRPWAYTGITQEMVERAKATANFKLVILKGRAYLETYQKSFQTRDVFTLWGILQLLRRYPGKVPDLELMFDCVDWPVVLANQYSGPVPQQPPPLFRYCGNDNTLDIVFPDWSFWGWAEVNIKPWEILLGELKEGNERIPWLNREPYAYWKGNPSVAETREDLMKCNVSQNQDWNARLYAQDWKRESEEGFKKSELASQCTHRYKVYIEGSAWSVSEKYILACDSTTLLVKPHYYDFFTRGLIPGHHYWPIKEDDKCRSIKFAVDWGNSHNQRAHQIGKAASEFIQEELKMDFVYDYMFHLLNAYAKLFTYKPSISGNATELCVESMVCGAEGLEKKFMMESLVKGPADTDPCTMPAPFDPPSLYEQLHRKKSSIQLVESWERSYWENQNITS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01077 517 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 69 511 - -
Vian8g01077 517 Pfam Glycosyl transferase family 90 113 506 IPR006598 -
Vian8g01077 517 SMART cap10 187 436 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01077 Vian-Chr8 28461707 28465151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01077 - - gmx:100789969 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01077 8 28461707 28465151 Vian8g01077 8 28461707 28465151 ECH