Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01062 ATGGCTTCCTTCACGTGCTCCCCCACCTCCCTCCAGCTTCGATTGGCCTTCGCCGCACCCAAATTCCCCCTTTCCCCGCACTTGCGAATGCGCAACCTCGAAACGAATCGCGTTCGCCCTCTACGCGCCGAGCGGGACGGCGCCGCCTCGGAGTGGACTGGGTCCAGGCTCAACCTCGACGGCTTCTCCGGCTGGTCCGACACCGACGCCGAGCAACAGAACGACAAGAAGGAGTCCTATGGAGGAGTTGTGGGAGTAGGAGTGGCTGGAGTGTTTCTTCTTTCAGGGCTTACCTTTGCTGCCTTATCTCTGGGCAAACAAACTGGTTCCAGACCAGAGCAGCACATGAAGCCCTTGACTACCCAGCAGGAGGAAATTTTGTCTTCTGATGATCATAATAATGAAACAACAGAACAAGCAAATGTTGATAAGGTGGAGCAAGGAAATGATAAAATAGAAGGTCAGATAGATATGTCCAATGATTATTCATCTTCTGAGTCGGGTAATATTTACCGTGACTATAGTATTGTTGATGATTCTGATATAGGATCCCAGTCGATATATGATAGTAAAAACCCCTCCGTTGATGTTGATGATGCCACTAAACATATATTTGTTCAAGAAGACTTACAGCATGAGTCAGCTTTTGATAACAAGTTAGTTTTTGCCAGTAAAAGCCCAGTATCACTTGAATCTGAAAATACTGTTGATTCTTTTAATGCTTATGGATTTAGAGATTTTGATAGCAACCCTGCTATAGATACAGCAGAATCTACTGCCAATCTTAAAGAAAACCTATTCAATGTTGATCCAGGAGATCTGCCCAACTACGATGGTACTGAACCACCACATCTTAATGCTGTTCAGCATGATGAAATAACCAGTTCAAGTGGAAATGTTAGTTTTGGTTTTAGTGAAACCTATTCTAGTTCAGGTGCTGATAACGAGACTGAAATTGTTAGTATTGTGGTCAGTCCTGAGTCAAGTAACACGATTTCAGATCATAAGTTTTTCAATGAAGCTGTTGAAGAAAATATCCTGTCAGCTTCAAAGAAAGAAAGCCTTGATCTGAACAAAATTCCACAGGTCTCTGCTGAGGGAAATGAGCCATCCCTTGAAGAGTGGAGCATTCCTGGAAATGATGTGTTTGAAAAATCATCTGTTTTATTATCAGCCAATGCACTGGTAGATGAGAAGGTTATAAATGATAATTATGAGGTTGATGAAGTTAAATCTGAATCTCCAAATTTTGGATCCTTTTTCTCTGTTCCTGGTATTCCGGCTCCATCAGTAGTTTCTGCAACTGCACAAGTGTTTCCTGGAAAGGTTTTAGTTCCTGCAGCTGTTGATCAAGTCCAGGGGCAAGCACTAGCTGCATTGCAAGTTTTAAAGGTCATTGAGCCTGATGTTCAACCTAGTGATTTATGTACTCGTCGTGAATATGCTCGCTGGTTGGTGTCTGCTAGCAGCATTCTTTCAAGGAGCACTGTTTCGAAAGTGTATCCGGCCATGTACATAGACAATGCTACTGAGCTTGCATTTGACGATGTCACCCCGGACGATCCTGATTTTTCTACCATTCAAGGCTTGGCAGAAGCTGGACTTGTTGAGAGCAGGCTTTCAAGACAAGATATACAGTTGTCTGGTGATGAAGATGATAGTCCATTTTTCTTCTCCCCTGGAAGTCCTTTATCTCGTCAAGATCTTGTCAGTTGGAAAATGGCCCTGGAGAAAAGACAGCTTCCAGAAGCTGACAGAAAGGTTGCTCAACTTACACTGTACCAACTTTCTGGTTTTCTGGACACTGATAAGATACATCCTAATGCATGCCCTGCCCTAGTAGCTGATCTATCTGCTGGCGAGCATGGAATAATAGCTCTTGCTTTCGGTTATACAAGATTATTCCAGCCAGATAAGCCAGTAACAAAAGCCCAAGCAGCTATGGCTCTAGCTACTGGAGAAGCTTCTGAAATAGTTAGTGAAGAGCTTGCACGCATCGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCTCATAGTGCTTTAGTAGCTCAGGTAGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTTTTACTAGAGAGGGAAAAGATCAATGCAGTTGAAAAAATGGCTGAGCAGGCAAGACTCGAGTTAGAAAGGTTAAGAGCTGAGAGAGAAGAGGATAACCTTGCATTGACAAAGGAGCGTGCTGCTATTGACTCAGAAATGGAGGTTTTTTCAAAGTTAAGGCATGAGGTTGAGGATCAATTGCAAATCCTTTTGAATGACAAGGTAGAAATAGCACATGAAAAAGAGAGGATTAACAAACTCCGGGAACAAGCAGAAGTTGAAAACAAGGAGATTGCTCGTTTACAGTATGAGCTAGAAGTAGAACGTAAAGCCCTTTCTATGGCCAGGGCTTGGGCAGAGGATGAGGCCAAACGAGTGAGAGAGCAAGCAATAGCCTTAGAGGAGGCTAGAGATCGTTGGGAGAGGCATGGGATCAAAGTGGTAGTTGACGATGACCTTCGCAAGGAGGCCTCCGCTGGAGTTACATGGCTCAATGCCTCAAAGCAGATTTCGGTTCAAGGAACAGTCGACAGGGCCGAAAACTTATTGGACAAGCTCAAACAAATGGCATCAGATGTCAGAGGAAAATCTAGAGACATACTTGACAAAATCATCCACCTGGTCTCCCAATTTATATCAAAATTGAGGGAATGGGCATCCAGAACAGGAAAACAAACTGAAGAATTTGGAGAAGCTGCCATATCAAAGGTAGGTAAGTCAGCCAGTGAGTTGCAACAAAGTGCTATTGAAGTTGGATTTGGTATCAAAGAAGGTGCAAAGCGTGTTGCTGGTGATTGTAGAGAAGGGGTTGAGAAAATCACTCAAAAATTCACACAGAAGTTCAAGACCTGA 2925 0.4359 MASFTCSPTSLQLRLAFAAPKFPLSPHLRMRNLETNRVRPLRAERDGAASEWTGSRLNLDGFSGWSDTDAEQQNDKKESYGGVVGVGVAGVFLLSGLTFAALSLGKQTGSRPEQHMKPLTTQQEEILSSDDHNNETTEQANVDKVEQGNDKIEGQIDMSNDYSSSESGNIYRDYSIVDDSDIGSQSIYDSKNPSVDVDDATKHIFVQEDLQHESAFDNKLVFASKSPVSLESENTVDSFNAYGFRDFDSNPAIDTAESTANLKENLFNVDPGDLPNYDGTEPPHLNAVQHDEITSSSGNVSFGFSETYSSSGADNETEIVSIVVSPESSNTISDHKFFNEAVEENILSASKKESLDLNKIPQVSAEGNEPSLEEWSIPGNDVFEKSSVLLSANALVDEKVINDNYEVDEVKSESPNFGSFFSVPGIPAPSVVSATAQVFPGKVLVPAAVDQVQGQALAALQVLKVIEPDVQPSDLCTRREYARWLVSASSILSRSTVSKVYPAMYIDNATELAFDDVTPDDPDFSTIQGLAEAGLVESRLSRQDIQLSGDEDDSPFFFSPGSPLSRQDLVSWKMALEKRQLPEADRKVAQLTLYQLSGFLDTDKIHPNACPALVADLSAGEHGIIALAFGYTRLFQPDKPVTKAQAAMALATGEASEIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELLLEREKINAVEKMAEQARLELERLRAEREEDNLALTKERAAIDSEMEVFSKLRHEVEDQLQILLNDKVEIAHEKERINKLREQAEVENKEIARLQYELEVERKALSMARAWAEDEAKRVREQAIALEEARDRWERHGIKVVVDDDLRKEASAGVTWLNASKQISVQGTVDRAENLLDKLKQMASDVRGKSRDILDKIIHLVSQFISKLREWASRTGKQTEEFGEAAISKVGKSASELQQSAIEVGFGIKEGAKRVAGDCREGVEKITQKFTQKFKT 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01062 974 Coils Coil 867 887 - -
Vian8g01062 974 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 968 - -
Vian8g01062 974 Coils Coil 698 739 - -
Vian8g01062 974 Coils Coil 761 795 - -
Vian8g01062 974 Coils Coil 807 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01062 Vian-Chr8 27993333 28006198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01062 - - gmx:100780360 1551.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01062 8 27993333 28006198 Vian3g00644 3 6555454 6558849 PCT