Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01038 ATGACTTCCCACTACGAACTCCAACTGCATCTCATGTCTGCGCGTGGTTTAAAAAACGTGAACTGGCGCCACGGCGCGAACCGCCCATACGCCGTCGTTTGTGTGGACCCTAAGAACAAGTTCTCCACGAGCGTCGACGAGGACGGCGACACCGAAGCTACTTGGGACCAAACCCTAGTTATTCCTCTTCCTCCTGAGCCTCTCGAGAATCTGACGCTCCATGTCGACGCGGTTCACGCAGGCTCCGAGGAGGACACCGAGCCGCTTATTGGCTCGGCGCGGCTCAAGCTCGTTGAAGTCCTTGAAGAAGTTGGAGTTAGAGTGCGCGTGAGCCGCACTCTCTCGCTGAACCGCCCTTCGGGAAGACCCCAAGGGAAAGTGGACGTTAATGTCGTTATAAGAGAAAGTGGCGGCTACCGTACGCAGGATGCGTATTATGCGCCTCCTATAGGTGTAAGGGATTATTCCCCTGTGTCGCAGGGCTATCAGGATAATAATAGTTATTACCATTCTGCGATCCAAACGACGTCGTATGGACAAGGGAGTGAGTACGCACCACAGGAAGAGAAGAAGAGTAAGTTTGGGGGGATGGGGACAGGATTGGCTGTGGGCGCGGTCGCTGGGGTTTTAGGTGGAATCGCGCTAGTGGAGGGTGCTGATTTCCTGGAGGAGAAGATTTCCGATGACGTGGCAGATAATATAGAGGATGATCTTGGATATGATGAAGATGATATCTAG 738 0.5339 MTSHYELQLHLMSARGLKNVNWRHGANRPYAVVCVDPKNKFSTSVDEDGDTEATWDQTLVIPLPPEPLENLTLHVDAVHAGSEEDTEPLIGSARLKLVEVLEEVGVRVRVSRTLSLNRPSGRPQGKVDVNVVIRESGGYRTQDAYYAPPIGVRDYSPVSQGYQDNNSYYHSAIQTTSYGQGSEYAPQEEKKSKFGGMGTGLAVGAVAGVLGGIALVEGADFLEEKISDDVADNIEDDLGYDEDDI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01038 245 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Vian8g01038 245 PANTHER INGRESSION PROTEIN FIC1 7 205 - -
Vian8g01038 245 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Vian8g01038 245 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Vian8g01038 245 SMART C2_3c 6 109 IPR000008 -
Vian8g01038 245 Gene3D C2 domain 1 134 IPR035892 -
Vian8g01038 245 Pfam C2 domain 6 100 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01038 Vian-Chr8 27403817 27404554 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01038 - - gmx:100805876 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01038 8 27403817 27404554 Vian8g01038 8 27403817 27404554 ECH