Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01028 ATGACGGATGTAGTACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAAACGAACAACACTATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGCATCTTCCACAGCGCCGTGCAGGTTTTTGGAGAGGATGAATGGTCATTTGGATTCTGTGATCAAGGAACCGGAGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATTTCGTGAATCCATTGTTCTTGGGAAAACAAACTTTTCCATCTTCAAGGTGAATCAAATACTAAGAGAACTTAGTAGAGAGTGGCCAGGGAGTTCATATGATCTGCTGGCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGGCTTGATGTACCAAAACTTCCAGCTTCCATGACAGGTTGGGTTAATAGATTTGCGAATGCCGGCGATACTGCTATGGAAGTGGCTGGAAACACTGCATTACGGTTCCGGCAAGCTAAAACCGAGATTGTGTCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGTGTTACGAATAATGTTACAAATAACGTTAAGAATGGTCCCGAGTCCCCTAACAACAATTCAAACAGAGGAGGGTCCCCTAGATTTCAAACTGCTTGGTTGAAAAATATGATCACTAATGGTGCAAAACCATCTACCAGTTCTGAAGCTGAGGATCAGAATGGAATTACGCCTCTACAGCCAAAGCGAGAAGATGAAAAAGCAATGCTACATAGTTCATCTTCACACGATAGTTGA 774 0.4251 MTDVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVFGEDEWSFGFCDQGTGVFSCPSGKNPMYTFRESIVLGKTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLDVPKLPASMTGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPESPNNNSNRGGSPRFQTAWLKNMITNGAKPSTSSEAEDQNGITPLQPKREDEKAMLHSSSSHDS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01028 257 Gene3D PPPDE domains 1 172 IPR042266 -
Vian8g01028 257 MobiDBLite consensus disorder prediction 186 234 - -
Vian8g01028 257 ProSiteProfiles PPPDE domain profile. 2 152 IPR008580 GO:0008233
Vian8g01028 257 Pfam PPPDE putative peptidase domain 3 149 IPR008580 GO:0008233
Vian8g01028 257 PANTHER DESUMOYLATING ISOPEPTIDASE 2 221 IPR008580 GO:0008233
Vian8g01028 257 SMART DUF862_2a 2 161 IPR008580 GO:0008233
Vian8g01028 257 MobiDBLite consensus disorder prediction 237 257 - -
Vian8g01028 257 MobiDBLite consensus disorder prediction 186 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01028 Vian-Chr8 27221472 27224419 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01028 - - gmx:100814440 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01028 8 27221472 27224419 Vian8g01028 8 27221472 27224419 ECH