Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01006 ATGAAGCAGAAAGTGGTGCTAAGAGTGGAGTTGAACAATGAAAGAATCAAGCATAAGGCTATGAAAACAGTATCTGATCTTCATGGGATTCAATCTGTTTCTGTTGACCTGAAAGAGAAGAAAATGGTCATATCAGGGAACATTGATCCGGTGTGTGCTGTGTTGAAGCTACGAAAGTGTTGTCACACTGAAATAGTTTTAGTTGAAGCAGCAAAAGAGGAGAAAAAAGAGAAAGAGAAAGAGGCAGAAAAAGTAGCTGTCAAGGTGTATGAACCCTATCCACTTTCTTATCAGATGATACCACCACAGTACAGTCATGGTTACTATGTCAAGGGTTACGAGGAGAATCCTTGTGGCTGTGTTATCTGCTAA 372 0.4005 MKQKVVLRVELNNERIKHKAMKTVSDLHGIQSVSVDLKEKKMVISGNIDPVCAVLKLRKCCHTEIVLVEAAKEEKKEKEKEAEKVAVKVYEPYPLSYQMIPPQYSHGYYVKGYEENPCGCVIC 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01006 123 Coils Coil 68 88 - -
Vian8g01006 123 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 85 - -
Vian8g01006 123 Gene3D - 1 74 - -
Vian8g01006 123 ProSiteProfiles Heavy-metal-associated domain profile. 2 69 IPR006121 GO:0046872
Vian8g01006 123 SUPERFAMILY HMA, heavy metal-associated domain 2 60 IPR036163 GO:0046872
Vian8g01006 123 Pfam Heavy-metal-associated domain 15 50 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01006 Vian-Chr8 26648961 26649725 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01006 - - gmx:100800537 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01006 8 26648961 26649725 Vian8g01006 8 26648961 26649725 ECH