Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00995 ATGCTTGCACTGATGGATTCTCCTCTACTTATTGCTAAAACATTTGAAATCATTAAAATACCAGCCAGTACACGGTGCACTGTGGTATGTGCTGCAAAAGGTCCAAGACCAAGGTATCCCCGAGTTTGGAAGACTAATAAAAAAATTGGGACCATTTCCAAGTCTGAGAAGCTTGTTAAGTCTATTAAGGAACTGTCAAATGTCAAAGAAGAAGTTTATGGAGCTCTTGATTCCTATGTTGCTTGGGAATTAGAGTTCCCTTTAATTACAGTAAAAAAGGCGCTCAAGACCCTAGAATACGAACGAGAGTGGAAGCGTGTAATACAGGTAACAAAGTGGATGTTAAGCAAAGGTCAAGGAAAGACAATGGGAAGCTATTTTACATTAATTAATGCTTTAGTAAACGATGACCGACTTGATGAAGCTGAAGAGCTTTGGACAAAGTTATTAATGCGGTATATGGAAAGTTTGCCTCGTAGATTTTTTGATAAAATGATATCTATCTACCATAAGAGGGGCATGCATGAGAAGATGTTTGAGATATTTGCAGACATTGAGGAGCTTGCTATGCGACCTAGTATGTCTATTGTGTCAATGGTTGGGGAAGCCTTTATAGAGCTGGGTATGCTGGACAAATACCATAAGTTGCATGCAAAATATCCACCACCAGAATGGGAATATAGATACAGCAGAGGAAGGCGTATAAAAGTCAAAGTGCAACCTCCATCTAAACAGGTCAACACATACACAGAAAGGCGTGAGAATGTTGAACAAGACTCAGACTTAAACAAGAATTATGAATCTTCAGAAGAGACTTCGGGGATAATTGATGACCAGCAAGTCAGACATGATAATGATGTAACAATATACATGGAACCTGAACAAATTTCAGACATTGCGGAGAGAATTGATGACGAGCAACTTAGGCAGGAGGCCGATGTAACATCCAATGAACTTGAACAAATTTCAGAAAATTCAAATCACAGTATGGAAACTATTTTAGATGTCTAA 1011 0.3858 MLALMDSPLLIAKTFEIIKIPASTRCTVVCAAKGPRPRYPRVWKTNKKIGTISKSEKLVKSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEYEREWKRVIQVTKWMLSKGQGKTMGSYFTLINALVNDDRLDEAEELWTKLLMRYMESLPRRFFDKMISIYHKRGMHEKMFEIFADIEELAMRPSMSIVSMVGEAFIELGMLDKYHKLHAKYPPPEWEYRYSRGRRIKVKVQPPSKQVNTYTERRENVEQDSDLNKNYESSEETSGIIDDQQVRHDNDVTIYMEPEQISDIAERIDDEQLRQEADVTSNELEQISENSNHSMETILDV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00995 336 MobiDBLite consensus disorder prediction 250 266 - -
Vian8g00995 336 Gene3D Tetratricopeptide repeat domain 46 297 IPR011990 GO:0005515
Vian8g00995 336 Coils Coil 305 325 - -
Vian8g00995 336 Pfam PPR repeat 165 187 IPR002885 -
Vian8g00995 336 Pfam PPR repeat 128 149 IPR002885 -
Vian8g00995 336 MobiDBLite consensus disorder prediction 316 336 - -
Vian8g00995 336 PANTHER OS01G0757700 PROTEIN 20 272 IPR044646 -
Vian8g00995 336 MobiDBLite consensus disorder prediction 240 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00995 Vian-Chr8 26508336 26512563 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00995 - - gmx:100809627 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00995 8 26508336 26512563 Vian8g00995 8 26508336 26512563 ECH