Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00954 ATGGCTCAGGTTGCGGTCTCACGTTCCATTCAAGGCTTCCTTTTATGTCCCTCTTCTGGATCTGCACGTGACAGGTCTCAAAACCTGTTAAAGCTTCCATCTTTTGCTTCCACGGTGTTACCTTCCCATGGGAACAATAGTAAACGCTCCCAACTCGCCCCCAGAAGCTTTCAGATCAGTGCAAGGAAATCTGCCCCTTCTGAAGTCATCCCTGTGTCACCCGAAGATGACCCAAAGATTGAGCAGCATTTGCAACATTTACGTGGGATGCAGCCATTAGGGGAGAATTCGGCTGGGATGTGGTCGAAGCCCACGTTTAGACGCAAGACAAAGATAGTGTGTACCATTGGACCTTCTACCAATACGAAGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAACGTGGCTCGATTGAATATGTCTCATGGAGACCATGCGTCTCATCAGAAAGTCATTGACTTGGTTAAGGAATATAATGCTCAAAGCAAGGACAATGTGATTGCAATCATGCTTGACACTAAGGGATTTGTTGTTCTTGTATATTTGCTTCGTGACAATTTTGTATTGGACATGGGTCCTGAAGTTAGGAGTGGGGATTTGCCACAACCTATTATATTGGATCCTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTACGATGATTTTGTCAATGACGTGGAAGTGGGGGATATGCTTCTTGTTGATGGTGGTATGATGTCTATGGTGGTTAAGTCTAAGACAGAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCTAGGCGACATTTGAATGTTAGAGGAAAAAGTGCTACACTGCCTTCAATCACTGAGAAGGATTGGGATGATATCAAGTTTGGAGTTGATAACAAAGTTGACTTCTACGCTGTTTCCTTTGTTAAGGATGCTGAAGTGGTTCATGAACTGAAGAATTATTTGAAGAGAAGTGGTGTTGATATACATGCCATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTCCCTATCGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTGTGTCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTAGAAAGCATGATTGTTCACCCAACTCCAACAAGAGCAGAGGTGTCAGATATAGCAATTGCTGTTAGAGAAGGCTCAGATGGAATAATGTTGTCTGGAGAAACAGCTCATGGAAAGTTCCCACTAAAAGCCGTGAAAGTAATGCATACAGTAGCATTGCGGACAGAAGCCACTATACCGGGTGGTCAAATGCCACCTAACATTGGTCCAGTGTTCAAGAACCACATGAGTGAGATGTTTGCTTACCATGCAACAATGATGTCTAACACCCTTGGAACATCAACTGTTGTCTTCACTAGAACGGGTTTCATGGCTATCTTATTGAGCCACTATCGTCCTTCTGGCACCATATTTGCTTTTACAGATGAGAAGAGGGTGCAGCAGAGGCTTGCTTTGTATCAAGGAGTCTGTCCCATATACATGGAATTCTGTGACGATTCTGAAGCAACCTTCAAAAGAGCCTTGGACCTTCTGCTGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACGCACAATATCCAGGTTAGGAAAGTGTAA 1716 0.4423 MAQVAVSRSIQGFLLCPSSGSARDRSQNLLKLPSFASTVLPSHGNNSKRSQLAPRSFQISARKSAPSEVIPVSPEDDPKIEQHLQHLRGMQPLGENSAGMWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGFVVLVYLLRDNFVLDMGPEVRSGDLPQPIILDPGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSMVVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKRSGVDIHAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIGPVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDSEATFKRALDLLLKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00954 571 Pfam Pyruvate kinase, alpha/beta domain 459 551 IPR015795 -
Vian8g00954 571 PANTHER PYRUVATE KINASE 81 333 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 Gene3D - 445 571 IPR036918 -
Vian8g00954 571 Gene3D - 108 336 IPR040442 -
Vian8g00954 571 FunFam Pyruvate kinase 433 552 - -
Vian8g00954 571 Gene3D - 194 289 IPR015806 GO:0004743|GO:0006096
Vian8g00954 571 SUPERFAMILY PK beta-barrel domain-like 194 285 IPR011037 -
Vian8g00954 571 FunFam Pyruvate kinase 195 288 - -
Vian8g00954 571 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 85 436 IPR015813 GO:0003824
Vian8g00954 571 PRINTS Pyruvate kinase family signature 366 390 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 PRINTS Pyruvate kinase family signature 341 365 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 PRINTS Pyruvate kinase family signature 410 426 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 PRINTS Pyruvate kinase family signature 391 409 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 PRINTS Pyruvate kinase family signature 166 182 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 SUPERFAMILY PK C-terminal domain-like 420 571 IPR036918 -
Vian8g00954 571 Gene3D - 338 426 IPR040442 -
Vian8g00954 571 Pfam Pyruvate kinase, barrel domain 108 335 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vian8g00954 571 Pfam Pyruvate kinase, barrel domain 337 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00954 Vian-Chr8 24259778 24265476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00954 K00873 - gmx:100803036 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00954 8 24259778 24265476 Vian8g00954 8 24259778 24265476 ECH