Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00876 ATGCATAGGATACGTCATGGGTGGTTGAAGAGTGCAAATTCTGCAATTTTGGTCGTCCTCTCCACCCACTCCCTCTTGGAGCATACCGACGTGGTTGTCCTGTTGGACAATGAAGCCATCTACGACATATGTAGGAGATCCCTCGACATCGAGAGACCCACTTACACCAACCTGAACCGCCTCATCTCTCAGATAATTTCTTCCTTGACCACCTCCCTCAGGTTCGATGGCGCCATCAATGTCGACATCACTGAGTTCCAGACCAACCTTGTGCCTTACCCTCGCATCCATTTCATGCTCTCGTCCTATGCTCCGGTTATTTCTGCTGCCAAGGCCTATCATGAGCAATTGTCCGTGCCCGAGATCACCAATGTCGTGTTTGAGCCTGCCAGCATGATGGCCAAGTGTGATCCCAGACACGGGAAGTACATTGCTTGCTGCTTGATGTACCGTGGTGATGTTGTTCCCAAGGATGTCAATGCTGCAGTTGCTACGATCAAGACTAAGAGGACTGTGCAGTTTGTTGATTGGCCAAACTCGTCATCTGTGCTTAGAACTGCAGTTAGCAGTGTGCCATTGCCATCTTGGAGTTATAATCTTACGCCACAAGTTGGTATTCTTCCTAAAGAACTGCAGTTAAGGCTCCATAGTGCGGATGAGGGAGTGTCGCAGTTGGAGATGCGGATGAGGGAGTGTCGCAGTTGGAGATGCAGGTGCGAGGGTGATGAAGATGCGAAAAAAAAGGCGCGATTCGGAGAGGCTTGCATCTCTGGTTTGGGGGAGGTTGCGGCGAAGCTTGCGAGGAAGGAGATCGAATCACGCTTGGTGGCGGAGGACGAAGGAATCGCGATTCTGGTGGCTGATACGATTCACGTTTTTGCGATGGTGGATAGCGGCGATTTGAAGGTTGAAGGTAGTGGCTTCAAGGTGGCTGACGGCTAG 942 0.5106 MHRIRHGWLKSANSAILVVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNVVFEPASMMAKCDPRHGKYIACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWPNSSSVLRTAVSSVPLPSWSYNLTPQVGILPKELQLRLHSADEGVSQLEMRMRECRSWRCRCEGDEDAKKKARFGEACISGLGEVAAKLARKEIESRLVAEDEGIAILVADTIHVFAMVDSGDLKVEGSGFKVADG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00876 313 SUPERFAMILY Tubulin nucleotide-binding domain-like 19 76 IPR036525 -
Vian8g00876 313 FunFam Tubulin alpha chain 97 150 - -
Vian8g00876 313 Pfam Tubulin C-terminal domain 94 181 IPR018316 -
Vian8g00876 313 Gene3D Tubulin/FtsZ, GTPase domain 10 96 IPR036525 -
Vian8g00876 313 SMART Tubulin_C_4 79 197 IPR018316 -
Vian8g00876 313 PANTHER TUBULIN 19 192 IPR000217 GO:0005874|GO:0007017
Vian8g00876 313 Gene3D - 97 202 IPR037103 -
Vian8g00876 313 PRINTS Alpha-tubulin signature 45 57 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vian8g00876 313 PRINTS Alpha-tubulin signature 152 173 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vian8g00876 313 PRINTS Alpha-tubulin signature 105 120 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vian8g00876 313 SUPERFAMILY Tubulin C-terminal domain-like 77 181 IPR008280 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00876 Vian-Chr8 20396099 20405547 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00876 K07374 - gmx:100806907 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01662 2 34286960 34289785 Vian8g00876 8 20396099 20405547 PCT