Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00875 ATGGGACACGACGAGTTGGTGACAGTTGACAACGTATCTGGAGATGAGCTTGAATCAACTTCTTCTGAGAAGGAAGAGAATTGGAGTGAAAATTTGGAGCAGAATTCTTCAGAGGTTAATTCTACATCTTCAGAGGTTAATTCTACACTTGGAGTAGGGCCTGTTGGAACTGAGAGTAACCTCCTTGTTGCTGCTGACAATGGGATTTTGTTTCCTAAATCAATGATGGAATTTTGGGATTCTCCAAGGCAGGACCTAATAGTGGACAGGCTTTCAGAGTGTGAGAAGCAAAAGCTGCTTAACCTTGTAAAGATACAAAATGATGGGACTGTTGACGTTGATCTGGAAAAAGGTGCACCTCTTGTATCCGAATTGTTGAAGTTTCAATCTTTTGAAGAGTCAACAACGAGTGCAAGTGTTGTTTCTGAATCAAAAATATCAGCTCCATGGTTACAAATTGTCATGCTTGTGGTTGGGACTAGAGGCGATGTACAACCTTTCCTGGCCATCGCAAAAAAACTCCAGGACTATGGTCATCGTGTTAGGCTGGCAACACATGCTGATTTTGACACATTTGTAAAGAGTGCTGGTGTTGATTTCTATCCGTTGGGTGGTGATCCTCGTGCTTTGGCAAGATATATGGTGAGGAATAAAGGTATAATCCCATCTGGTCCAACTGAAATATCTATCCAAAGAAAGCAGCTAAAGGCTATTATTGATTCTCTTCTTCCAGCATGCATAGAACCTGATTTGGAAACTGGTATTCCTTTTAGAGCTCAGGCTATTATAGCCAATCCTACAGCATGTGGACATACACACATTGCTGAAGCCCTCGGGGTGCCCCTTCACATCTTCTTCACAATGCCTTGGACGCAGGCCAACATATGA 888 0.4257 MGHDELVTVDNVSGDELESTSSEKEENWSENLEQNSSEVNSTSSEVNSTLGVGPVGTESNLLVAADNGILFPKSMMEFWDSPRQDLIVDRLSECEKQKLLNLVKIQNDGTVDVDLEKGAPLVSELLKFQSFEESTTSASVVSESKISAPWLQIVMLVVGTRGDVQPFLAIAKKLQDYGHRVRLATHADFDTFVKSAGVDFYPLGGDPRALARYMVRNKGIIPSGPTEISIQRKQLKAIIDSLLPACIEPDLETGIPFRAQAIIANPTACGHTHIAEALGVPLHIFFTMPWTQANI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00875 295 MobiDBLite consensus disorder prediction 17 31 - -
Vian8g00875 295 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 49 292 - -
Vian8g00875 295 Pfam Glycosyltransferase family 28 N-terminal domain 153 294 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vian8g00875 295 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 153 291 - -
Vian8g00875 295 Gene3D Glycogen Phosphorylase B; 152 294 - -
Vian8g00875 295 MobiDBLite consensus disorder prediction 32 51 - -
Vian8g00875 295 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00875 Vian-Chr8 20304311 20313584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00875 89 291 Glycosyltransferase AT3G07020 58.454 3.01e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00875 K05841 - gmx:100797391 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00875 8 20304311 20313584 Vian8g00875 8 20304311 20313584 ECH
Vian8g00875 8 20304311 20313584 Vian3g00720 3 7528819 7538725 PCT