Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00838 ATGAAGCATCATCATAGGTCACCACACCACCAACAGCTCTTCTGGGCAAAGGTGGTCATGCGTAAGTGGCTTAACATGGGGAGTTACGAGTCTGATTACAGTGCTGACCCTGATGATGACGATGAAGATTCTGAGAGTGCTTCAGACAACGAAGAATGGGGAGGACAGTCGCGGTTTGCAGACAACAGAGGTTATGATGATGAAACTCCATCTGAATCTACAGAATTTCTTCCCAAGTTAAGGAGGCAAAAGTCATCAACTTTTAGATCTCAGTATATAAACCAAAAGGAGTTGAAGATATGTGTTGGGACATGGAATGTTGGAGGAAAACTTCCACCTGATGACCTTGTTATTGATGATTGGCTTGGTGTCAATGAACCAGCTGACATCTATGTACTTGGTCTTCAAGAGATTGTACCCTTAAATCCTGGTAATATTTTTGGTGCTGAAGATACTAGTCCTGTTCCAAAATGGGAGAATATTATTCGAGAAACACTGAATAGAGTTCGACCTGAAATACCAAAGATAAAGTCCTTTAGTGACCCTCCCTCTCCATCAAAATTTAAGCCATCAGATGATGTGCCTGATATAGAAGAAGAAATATTGCTTGAAAGTGATAGTGACATTGGTGAGGAAGTCCATCCTTTGGCTGAAGACAACAATTTTTGTGATGGAGTTAAAACTGGTTTACAGAGACAGTTTTCTTTTCCAAAGATGTTTGATAGGCAACAGGGTTTGTCAGAAAACATGGACACGTCATTTTCCCAACAGGCCACTAAACTAACTCGAATGCTTAGTGGGTCTGAAAGGATTGGTTTGAGCTGGCCAGAGCCTCCACTGCATCTGCTATCTCAGAGAGTTTTGGATAGACCAACTTCTTTTAAATCATTGAAATCCTTTAAATCATCCAAGTCATTCAAAACATATAACTCTTTCAAGTCAATTATGGATGAAATTCCAGGGGCAGGATTGATTCCTGAAATTGACCTTGAAGCTTTGATAAAGCGAAAAAGAAGATCTTCATATGTAAGGATTGTTAGCAAGCAAATGGTTGGGATTTTCATCACTGTATGGGTTCGTCGGAGCTTGCGTAAACATATTCAAAATTTAAAGGTTTCAACTGTTGGTGTTGGTGTTATGGGCTATATTGGGATCAATATCTATCAGTATGTCCATACATCAGACACTCTTTTGTTTCATATGTACCCACCTTACCTCAGGTGA 1224 0.3995 MKHHHRSPHHQQLFWAKVVMRKWLNMGSYESDYSADPDDDDEDSESASDNEEWGGQSRFADNRGYDDETPSESTEFLPKLRRQKSSTFRSQYINQKELKICVGTWNVGGKLPPDDLVIDDWLGVNEPADIYVLGLQEIVPLNPGNIFGAEDTSPVPKWENIIRETLNRVRPEIPKIKSFSDPPSPSKFKPSDDVPDIEEEILLESDSDIGEEVHPLAEDNNFCDGVKTGLQRQFSFPKMFDRQQGLSENMDTSFSQQATKLTRMLSGSERIGLSWPEPPLHLLSQRVLDRPTSFKSLKSFKSSKSFKTYNSFKSIMDEIPGAGLIPEIDLEALIKRKRRSSYVRIVSKQMVGIFITVWVRRSLRKHIQNLKVSTVGVGVMGYIGINIYQYVHTSDTLLFHMYPPYLR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00838 407 MobiDBLite consensus disorder prediction 33 49 - -
Vian8g00838 407 MobiDBLite consensus disorder prediction 61 75 - -
Vian8g00838 407 MobiDBLite consensus disorder prediction 32 75 - -
Vian8g00838 407 FunFam Type I inositol polyphosphate 5-phosphatase 1 79 182 - -
Vian8g00838 407 SUPERFAMILY DNase I-like 81 383 IPR036691 -
Vian8g00838 407 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 19 384 IPR045849 GO:0004445
Vian8g00838 407 Gene3D Endonuclease/exonuclease/phosphatase 295 386 IPR036691 -
Vian8g00838 407 Gene3D Endonuclease/exonuclease/phosphatase 77 181 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00838 Vian-Chr8 19086375 19089622 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00838 - - gmx:100811025 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00838 8 19086375 19089622 Vian8g00838 8 19086375 19089622 ECH