Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00835 ATGGCCATAAAGGCAATTGAATTGTTGAAAGGAGGTGAAAACCATGAAGAGATAATGGAGGTTCTTGCAGCAGTGGCTGCAGATTTGGGAGATGTAATAGATGATCTGAACTCTTTGCTGGTAAAACCTCTAAAAGGAGCAATGACCAATGAGGTTTTTGAGGTAAATTGGCCAACCAAAAGTGATGGTCATCAGAGAAAGGTTCTGGTTCGATTATATGGTGAAGGTATTGAGGTTTTCTTCAACAGGGTTGATGAAATCCAAACCTTCGAATCCATGTCAAAGCATGGACAGGGTCCACGCCTTCTTGGACGGTTCACCACTGGCAGAGTTGAAGAGTTCATTCATGCCAAAACACTCTCAGCTGCGGACCTCCGTGACCCTCAAATATCTGCTTTGGTAGCATCTAAGATGAGAGAGTTTCACAATCTTCACATGCCTGGTACAAAGAAAGCACAGCTTTGGCAGCGATTGAGGAAATGGCATAGTCATGCCAAAAGTTTGTGCTCTCCAAAAGATATTAAGAATTTTGGCCTGGAACATCTAGATACTGAAATAAATATGCTTGTGGAGTTGCTATCACAAGGATATCAAGAGATTGGTTTTTGTCACAATGATCTTCAATATGGTAACATAATGATGGATGAAGATACAAGGGCAATCACTTTAATTGACTACGAATATGCCAGTTACAACCCTGTTGCATACGATCTAGCAAATCATTTCTGTGAAATGGTGGCAAACTATCACAATGACCAACCTCATGTTCTTGACTACACTAAATATCCCGGTCTTGAAGAGCGTCAAAGGTTTGTTTATAATTATTTGAGTTCTGAAGGTTAG 843 0.4057 MAIKAIELLKGGENHEEIMEVLAAVAADLGDVIDDLNSLLVKPLKGAMTNEVFEVNWPTKSDGHQRKVLVRLYGEGIEVFFNRVDEIQTFESMSKHGQGPRLLGRFTTGRVEEFIHAKTLSAADLRDPQISALVASKMREFHNLHMPGTKKAQLWQRLRKWHSHAKSLCSPKDIKNFGLEHLDTEINMLVELLSQGYQEIGFCHNDLQYGNIMMDEDTRAITLIDYEYASYNPVAYDLANHFCEMVANYHNDQPHVLDYTKYPGLEERQRFVYNYLSSEG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00835 280 PANTHER CHOLINE/ETHANOALAMINE KINASE 16 278 - -
Vian8g00835 280 Pfam Choline/ethanolamine kinase 65 266 - -
Vian8g00835 280 Gene3D - 84 280 - -
Vian8g00835 280 Gene3D Phosphorylase Kinase; domain 1 34 83 - -
Vian8g00835 280 SUPERFAMILY Protein kinase-like (PK-like) 35 277 IPR011009 -
Vian8g00835 280 CDD ETNK_euk 41 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00835 Vian-Chr8 18967223 18969694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00835 17 277 Acyl Lipid Metabolism Gene Families AT1G74320 63.602 3.12e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00835 K14156 - gmx:547972 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00835 8 18967223 18969694 Vian8g00835 8 18967223 18969694 ECH
Vian8g00835 8 18967223 18969694 Vian3g00750 3 7876520 7880156 PCT