Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00802 ATGCGGCGTGACATCGCCAAGCTGCTTGAGACTGGCCAAGAAGCCACAGCTCGTATTAGGGTAGAACATATTATCAGAGAGGAGAATATGATGGCTGCCCAAGAAATCATTGAACTCTTTTGTGAACTTATTGCTGTCCGTCTTCCAATAATTGAATCTCAAAGGGAATGTCCACTTGATTTGAAGGAAGCCATATCTAGTGTATGTTTTGCTGCACCAAGGTGTGCAGATCTGCCAGAGTTGTTGCAGGTTCAGATGCTATTTGCTGCCAAATATGGGAAGGAATTTTTATCTGCTGCAACTGAGCTCAGGCCAGACTGTGGTGTTAATCGCCAGTTAATAGAGCTACTTTCAATCCGTGCTCCTTCACCAGAAAAGAAACTGAACCTTCTGAAAGACATTGCTGTTGAGCATGATTTAGAATGGGACCCAGCAGCATCAGAAACTGAGTTCTTTAAAAAACATGAAGATTTATTGAATGGCCCCACCCAATTCTATAGTGGGTCTAAGTTGCCCCTTCCTGATGAAAAACCACACGAAGAGATGTACTCTGCTCATGAAACACCCAATAAAGAAGAACCTGATTCTGATTCTGGCTCTGATACATTAGAATTTCCTGAAGTTCCTAAAGTATCAGTCCGGCCTAACGCAAATGTTGCCACAGCTCCAGAAATGGTTACACATCTGACTATGGAACCCCTTGATGTTGATCTTGATTCATCAAGCAATTCCGGAGATTTTGAAGATGTCAAGCAGGAGCAAGTTGAAGATAGATCAACAGTTCACAAAGATGAACCCCATACCTCAATTGCCAAAGAGAATATACAGTTCGTGCCATTCATCTCTCCTCCAGCATTATCATCTGGATCATTTTCTGCAAGACCCAGTGAATCATCTCCCACCTTGTCAAGCGCAAAACCGGAACCCAATGTGGACTTACAGGATGTGTTGGCTGCAGCCCATGCTGCTGCAGAAACTGCTGAACGGGCTGCAGCTGCAGCTCGCACAGCAGCTAGTCTTGCTCAAGTCCGTAACTCTGATGTCCATAATACAAAAGATCTTGAACATTACCAGGATGATTATACTTCCTCAGGCTCTCATTCATCAAGCTTTCCTTCCTTTGACGCACTCAAGGAAGATTTGGGTTCCTCCTTGCCCCGTAATCACGTACTGAATGACAACTCCTCTAGTCACCAGCCCAAGAGATTACCTTCAATGGATGATGATTCATACTTCTCATACCCCAACTTATTTACCTCTCAAAACTCGAATGTTGGATCTCAGACTCATTCAGATAATAGCCGTGCCCCTCATGATCTGTGA 1323 0.4399 MRRDIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQMLFAAKYGKEFLSAATELRPDCGVNRQLIELLSIRAPSPEKKLNLLKDIAVEHDLEWDPAASETEFFKKHEDLLNGPTQFYSGSKLPLPDEKPHEEMYSAHETPNKEEPDSDSGSDTLEFPEVPKVSVRPNANVATAPEMVTHLTMEPLDVDLDSSSNSGDFEDVKQEQVEDRSTVHKDEPHTSIAKENIQFVPFISPPALSSGSFSARPSESSPTLSSAKPEPNVDLQDVLAAAHAAAETAERAAAAARTAASLAQVRNSDVHNTKDLEHYQDDYTSSGSHSSSFPSFDALKEDLGSSLPRNHVLNDNSSSHQPKRLPSMDDDSYFSYPNLFTSQNSNVGSQTHSDNSRAPHDL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00802 440 Gene3D - 1 149 IPR042277 -
Vian8g00802 440 FunFam IST1-like protein isoform A 1 151 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 387 401 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 163 217 - -
Vian8g00802 440 PANTHER IST1 FAMILY MEMBER 1 421 IPR005061 GO:0015031
Vian8g00802 440 MobiDBLite consensus disorder prediction 235 268 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 358 440 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 173 198 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 287 308 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 244 268 - -
Vian8g00802 440 MobiDBLite consensus disorder prediction 412 433 - -
Vian8g00802 440 Pfam Regulator of Vps4 activity in the MVB pathway 1 140 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00802 Vian-Chr8 17064874 17074168 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00802 - - gmx:100800901 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00802 8 17064874 17074168 Vian8g00802 8 17064874 17074168 ECH