Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00495 ATGAAGTTTCTTCTCCAATTTCCTCTTCTCAAAGGGAACAACAACAATAGATCAAAACAAACAATGTCACAAAAAGTTACAATACTAGTAGTATTCTCATCCTTGTTCGTATTCCTTATCACCATAATTTCTTATTCTTTGCTGTGGAAGATCAATGAATTCAGGGGGCTGGGGCTATCTATTGATATTGATTATGGTTTGAAGAATGAGACAGAAAGTCTGCAGAATCAGACAGAAAGTCTGAAAAATGTGACAGAAAGTTTGAAAGATCAGACATGTTTGAGGAATGATACAGAAAATTTGAGGTATAGTTTGAGGAATGAGAGAGAAAACATGGCATCAAAACCTTTGAAGAAGTGTGACATTTTCAGTGGGGAATGGGTGCCAAATCCTGAAGCACCATACTACACAAACACAACATGTTGGGAAATTCATGAACACCAGAATTGCATGAAGTATGGAAGACCAGATTCTGAGTTCATGAAGTGGAGATGGAAGCCAAATGAGTGTGAACTTCCCATCTTCAACCCTTTTCACTTTCTAGAAATTATGAGAGGAAAATCAATGGCTTTTGTTGGAGACTCCATTGGCAGAAATCACATGCAGTCCATGATTTGCCTGTTATCTAGGGCTGAGTGGCCCATAGATGTATCATACACAGATGAGTTTTCCTTCAAAAGATGGCAGTACTCGAACTACAACTTCACAATGGCTACTTTTTGGTCACCCTATCTAGTTAGAGCTGAACAAGTTGATTCAAAGGGTGATCTCATCAACATTTATCTTGATGAGTTTGATGAAAAATGGACGGCTCAAATTAAAGAGTTTGACTATGTTATTATCAATGGAGGACAGTGGTTCTTGAGGCCAATAGTGTTCTACGAGAACCAAAAAATTGTTGGATGTCAATATTGTTCATGGGAAAATGTCACGCATCTAACATGGCACAGTGGCTATGGGAAGGCTTTTAGGACTGCATATAAAGCCATAGTCAATTTAGGAAACTCCAAGGTTGTAACGATTCTTAGAACGTATGCTCCATCTCATTTTGAGAATGGGGTGTGGGATAAAGGTGGGAATTGCATAAGAACTAAGCCATTTAAGAGTAATGAAACAAGGTTAGAGGGCTACAATCTTGAGTTACACACCATACAATTGGAGGAGTTCAAACGTGCTGAGAAAAAAGCTATGAAGAGAGGTTTGAAATTCATGTTACTTGACACCACACAGGCTATGTTACTCAGGCCAGATGGTCATCCCGATAAATATGGTCACTGGCCTCAGGAGAATATGACAGTATCTAATGATTGTGTGCATTGGTGTTTGCCAGGACCTATTGACACAATGGCTGATTTTCTATTGGAAACGTTGAAAAGGGAAGGTGTCACATCTTTTCCTAAAAAAGATTTCATCTAA 1416 0.3863 MKFLLQFPLLKGNNNNRSKQTMSQKVTILVVFSSLFVFLITIISYSLLWKINEFRGLGLSIDIDYGLKNETESLQNQTESLKNVTESLKDQTCLRNDTENLRYSLRNERENMASKPLKKCDIFSGEWVPNPEAPYYTNTTCWEIHEHQNCMKYGRPDSEFMKWRWKPNECELPIFNPFHFLEIMRGKSMAFVGDSIGRNHMQSMICLLSRAEWPIDVSYTDEFSFKRWQYSNYNFTMATFWSPYLVRAEQVDSKGDLINIYLDEFDEKWTAQIKEFDYVIINGGQWFLRPIVFYENQKIVGCQYCSWENVTHLTWHSGYGKAFRTAYKAIVNLGNSKVVTILRTYAPSHFENGVWDKGGNCIRTKPFKSNETRLEGYNLELHTIQLEEFKRAEKKAMKRGLKFMLLDTTQAMLLRPDGHPDKYGHWPQENMTVSNDCVHWCLPGPIDTMADFLLETLKREGVTSFPKKDFI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00495 471 Pfam PMR5 N terminal Domain 118 171 IPR025846 -
Vian8g00495 471 Coils Coil 67 91 - -
Vian8g00495 471 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 172 455 IPR026057 GO:0016740
Vian8g00495 471 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 44 454 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00495 Vian-Chr8 8343550 8347267 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00495 - - var:108344985 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00169 2 1612649 1616714 Vian8g00495 8 8343550 8347267 PCT