Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00213 ATGGAGAACTCGGAGAAGGTGGTGGCTGTGATCATGGTGGGTGGGCCAACCAAAGGGACCAGATTTCGGCCTCTTTCGTTCAATATTCCCAAACCCCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCACCATCCTATTTCTGCTTGCAAAAGGATACCCAATTTGGCTCAAATATATCTTATTGGATTCTACGAGGAGCGAGAATTCGCTCTATATGTCTCTTCAATCTCAAATGAGCTGAAATTACCAGTAAGATATTTGAAAGAAGATAAACCGCGTGGTTCAGCAGGTGGCCTTTACTACTTCAGAGATATTATCATGGAGGACAGCCCATCACATATATTTCTGTTAAACTGTGATGTTTGCTGCAGTTTTCCACTACCAGCAATGCTTGATGCCCATAAAAGATATGGTGGGATGGGGACAATGTTGGTGATCAAGGTTTCAGCTGAATCTGCTAACCAATTCGGTGAGTTGGTTGCTGATCCAACCACTAATGAGTTGCTGCATTATACTGAGAAACCTGAGACATTTGTCAGCAATTTGATAAATTGTGGTGTGTACGTTTTCACCCCTGATATTTTTACTGCAATTGATGATGTATATATTAATCGAGAAGGCATAGCTAATCTACGACGTCTCTCCAACTTTGAAACACTCCAATCTGCCTCAAGGAATATTCCTGCAGATTTTGTAAGACTGGATCAGAATATATTATCACCTCTAGCTGGGAAGAAGCAATTATATACGTATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCTGGAATGTCATTGAAATGCTCAGAATTGTATCTTGCTCAATTCCGGTATACTTCACCTGATCTTTTGGCCAGTGGAGATGGTATTAAGAGTGCAACAGTTTCTGGCAATGTATATATTCATCCCTCTGCAAAAGTTCATCCATCTGCGAAGATTGGTCCCAATGTTTCTATCTCAGCAAATGTTCGTGTAGGTGCTGGCGTCAGGTTGAGCGGTTGTATCATCTTGGATGATGTTGAAATTATGGAAAATGCTTTCGTCACAAACTCGATTATTGGATGGAAGTCATCACTTGGAAGATGGTCACATGTGCAGGCTGATGGTAACTATAATGCAAGACTTGGCACAACCATTCTAGGGGAAGCTGTAACTGTTGAAGATGAGGTGGTAGTGTTCAACTGCATTGTTCTTCCCAACAAAACTCTTAATGTCAGTGTGCAAGAAGAAATCATCTTGTAA 1245 0.4137 MENSEKVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKLPVRYLKEDKPRGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPAMLDAHKRYGGMGTMLVIKVSAESANQFGELVADPTTNELLHYTEKPETFVSNLINCGVYVFTPDIFTAIDDVYINREGIANLRRLSNFETLQSASRNIPADFVRLDQNILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLAQFRYTSPDLLASGDGIKSATVSGNVYIHPSAKVHPSAKIGPNVSISANVRVGAGVRLSGCIILDDVEIMENAFVTNSIIGWKSSLGRWSHVQADGNYNARLGTTILGEAVTVEDEVVVFNCIVLPNKTLNVSVQEEIIL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00213 414 FunFam Putative GDP-mannose pyrophosphorylase 283 411 - -
Vian8g00213 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Vian8g00213 414 Pfam Nucleotidyl transferase 9 200 IPR005835 GO:0009058
Vian8g00213 414 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Vian8g00213 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 414 - -
Vian8g00213 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Vian8g00213 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Vian8g00213 414 Gene3D Hexapeptide repeat proteins 287 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00213 Vian-Chr8 2992786 2998445 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00213 K00966 - gmx:100782402 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00213 8 2992786 2998445 Vian8g00213 8 2992786 2998445 ECH