Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00076 ATGGGCACGGATGATAGCGACAGCATGGTACTGGGTTCATCTCCTGTGCAAGAAAGTGGGAGCGTGGTTCGAGGTTCAGAGCAGGCGAAGGAGGCTAGGGAAGATGTTGGGGGTTTGAGAAGTGAGGAGGGATGCGGTGGGGTTGCTGTGAATGGGGATGGTTTTTCTAGCATTGAAAACCAAGGTTTGGGTGATGAAGGGGTTGTTAATGTTGTCAATAATAGTAATGTATTGGAGGCCAAGGTTTCGGTTGTGAGTGGAAATGATTGTCAAGTTTTGGCTGATTCTGAGGTGAATGGGGTGACCTCTTGGTTGGGAATGCAAGAAAGTGATATGAGCACTGTGTTTTCTAGTGGTGGAACTGAGAAGCTGGACTATGATTATGCATCTGAGAAGATGGACTATATGTTTGCTTCTGAGATGGAAGAGACTGCTGTTTTGAGTTTGGATGGATCGGTTGGGGATGGTGGAGAACATGGAAGTGATGGAGGTAGGAGTGGTGAGGAAGGAAAATATGAAGATTGTGATGTCGATAATGTCACTCTTGGTTCGGAGAGTAGAGTAGTAGAAGTAGCTGTTTTGAGTGGGGATAGTGTGGTAGGGGCTGGTGCTGAACGCACAATAGATAGGAAGGAAGTTGAAGACTGTGATGTGAACATTGGGGGTATTGATACTGAGAGTAGAGGGGGGGTAGCTGCTGTCATGAGTGTGCATAGTTTGTTAGGAGTTGATGGTTGTGACAGAAGAGAAGAGGATATGATCGAAGAGAAAGATAAAGACGATGATGGGAACATTGTGGTTGGGTTTGATGGGCAAGGCAGAAGAGAAGAGGAAGGTAAAGATGAAGATTGTGATGGGAATGATGTGATTACTACTTCTGAGAGTGGTCCAGCAGAAGCTGCTGTTTTGATTGTGGGCAAGGAAGATGCTAGAGAAGAAGATATGGGTGAAGGGGAAAGTGGAGATGGAGACTGTGATGGGAATGTTGTGTCTGTGACTTCTGATAGTAGGCTAGCAGAAGCTGCTGTTTCTGGTGTGGGTATTTTTGTAGGACTTGGCAGGGAAGACAAAAGAGAAAAGGATATCAGTGAAGAGGAAGGTGGAGACCAAGACCGTGATGGTAATGTTGTGACCATTACTTCTGGGAGTAGAGTATCAGAAGATGCTGTTTTGAGTGTTGATAGTTTTGCAGGAATTGGAGGACAAGACAGAAGAGAAGAGAATACACGTGAAGAGGAAGGCAAAGACAAAGACTGTGATGGAGACATTGTTGCTGTTGCTTCTGAGAGTAAAGTTGCAGAAGCTTCTGCTTTAAGGGTGGATAATTTGACAAATATTGGTGGGAAAGATACATTAGGTGAAGACTGTGATGGGAATGTTGTGACTCTTGCTTCTCAGAATGAAGTTGGAAAAGCTGCTGACTTTAGTGGGGATAGTGTGGTAGGTCTTGGTGCATATGACAAAACAGTGGAGGAGTGTGAAGGCAAAGGAAAGAAAGCAGAATGTGGTGGGAACATTGTGACTATTACTTCTGAGAATAGAGCAGAAGATGCGGCTGTTTTGAGTGTGGATGGTTCAAAAGTGGTTGGTGTTGAGGAAGCAAAAGACGGGGGAGACAGTGAAGAGGTAGAAAAAGACAAAGATTGTTCTGAGAACATTGTGACTATAGAGGTTCCAATTGCAGAGACAAGTGAGAACATGGATGTAGACGTGGAGGACTTGAGCGATGAAGGGTATGGTTTTGCTGTTGGTGATTTTGTTTGGGGTCAAGCTGATAGTAAACTTTGGTGGCCTGGCCGAATTTATGACCCATCTGATGCATCTGACGACGCATTGAAGCTGAAACAAAAGAACAGACTTCTGGTTACCTACTTTGGGCATGGAACCTTTGCATGGTGTCATCCATCACAGTTAAAGCGTTTTGAGGATAACTTTGATGATATGGTTAAACAGAGTAGCTGCATCGATTTTGCCAATGCTGTGCAAGAAGCTGCAAGTGAGGTCGGAAGGCTTCTGTCTATGAAGCTGAGTCGTTTAGTTGTTGACCAAAAAAAAGGTTCTGAATCTGAATCTATTGTCCTCTTGGAGAAAAATTCTGGAATCAAGGAAGGAGTTGTTGTGCCAGAAACTGGCATAGATAGACTTTTATATAGTCAATTTGAGCCAGCAGAATTACTTTCTCATGTGAATCGAATTGCAAGAATTATTGATAGTGGTAGTAGTATTATGGAGCTGGAGATCTTGAAGGCTCGACTTTCTGCATATTATCTGTCAAAAGGGCATAAATTACCTGATTTTATGGATACCCAGCTGGTGCCTGGAGTTGGAGATAGTCTAATGGATGAAACAGTTGCTGTGGAGAACAGTAAAAGTACTGTGGAAGCCCCGACCCAAGGACCATTTGATGAGTTGGGTCATTCTCCAGGGCTTTCAGGGAGCATATCGAACCATGTAAGAAAGCAGAAAAGCATTGCTGAAATTATGAGGGAGGACAAAGATGTTCATACAGCAAGTAGGGGGGTGGAAGCAATTGGCTCAAATGGTGGAAAGAAGAGAAAAGGTGGTGAGGATGGTATGGCATCTAAACCTGTTCAGAAGAAAAAAGAGTTGCTGCTTGTAGACACTGATGAAGATGTGTCAAGTGCTGAACATTCTGCCAAGGAAAACAGTGGTAGCATTGGCTCATGGCTGCGGTCAAAGGAGAAGAAAGAAGTTTTAGATGAAGGGAAGAGCGAAGAACGAAGCAGGAAGGGTAGTTTGTCTAGAGAAAGGAAGAAAAGTAAGTACTTGTCCCCTCCTTTCACTACTCCAATCAGGGGGCAAAGGGAGGAAAGTATGGAAGCAGAATCCTTTACAGTATCCAGAAAAGTTAAAGCATCACAGACAAGTGCAGTGGCTGCTGTTCTGCAATATCCTCCAGTTTATATGGGGAGGTTTTTTGATAGCTCAAATTACCAAACTGAAGAAGATGATGGGAAAATGGTTATTGATCCAGAGAAAATCCAGGCTCCTGTGGAGGAAGTTCTGTTCCAAGTCCGTAATGCAGCTATTAGTCCTCAAATTCGTAGGGAAGGCACTTCTCTTGACCAATTTGTTGACTTCACTTTTGTCTTTAGAAGTTCATTATATTCTGAAGGATCTTTACTTGATGTGTACGAGAAGAATGAGCCTGGAAGGAAAAGAAAGAAGCCAGAATCTGAAGAAGATGGAGTGTTGAAAGAGGCTCATATACCATCAGTGAAACAAAAATCTGGGACAAAGAAGAAAAGAAAGGAAACTGCTTCAGGTAAGAAGGGGGCTGATGAAAATGCTGAAGGGGCGGTTCTTGTTGTTTCATTTTGCCCAGGAACATCTATGCCTTCAAGATCTGACCTTATCTCAGTGTATAGTAAGTTTGGAGCTCTGAATGAAGCAGAAACAGATATGCTCTACAATGACTACACAGCTAGAGTGTCCTTCCTGAGAAGTTTTGAAGCTGAAAACGCCTTCAACCATTCTAAAAGCAATAACCCTTTTGGATCTTCTGATGTCACTTTTCAGCTCGAGTATGGACAAGATGGTGAAAGATCAAAGAACACGCCTTTGCTAGCAGCTACACCACCATCAGTTTCACTGTCACAGGGTGGTGAAGCATCCAGATTGATCTTTATCCAGAAGAAGCTTCAAGGTCTGACTTTGATTCTGGAAGCATCAGGTGACAAATCTCCCGATTTGATGGCTAAACTACAGAGTGAGGTGAAGGCTCTTCTGGAGGATGTCAACCAAATGGTTGAAGCTTCTCTGTTTTAG 3789 0.4347 MGTDDSDSMVLGSSPVQESGSVVRGSEQAKEAREDVGGLRSEEGCGGVAVNGDGFSSIENQGLGDEGVVNVVNNSNVLEAKVSVVSGNDCQVLADSEVNGVTSWLGMQESDMSTVFSSGGTEKLDYDYASEKMDYMFASEMEETAVLSLDGSVGDGGEHGSDGGRSGEEGKYEDCDVDNVTLGSESRVVEVAVLSGDSVVGAGAERTIDRKEVEDCDVNIGGIDTESRGGVAAVMSVHSLLGVDGCDRREEDMIEEKDKDDDGNIVVGFDGQGRREEEGKDEDCDGNDVITTSESGPAEAAVLIVGKEDAREEDMGEGESGDGDCDGNVVSVTSDSRLAEAAVSGVGIFVGLGREDKREKDISEEEGGDQDRDGNVVTITSGSRVSEDAVLSVDSFAGIGGQDRREENTREEEGKDKDCDGDIVAVASESKVAEASALRVDNLTNIGGKDTLGEDCDGNVVTLASQNEVGKAADFSGDSVVGLGAYDKTVEECEGKGKKAECGGNIVTITSENRAEDAAVLSVDGSKVVGVEEAKDGGDSEEVEKDKDCSENIVTIEVPIAETSENMDVDVEDLSDEGYGFAVGDFVWGQADSKLWWPGRIYDPSDASDDALKLKQKNRLLVTYFGHGTFAWCHPSQLKRFEDNFDDMVKQSSCIDFANAVQEAASEVGRLLSMKLSRLVVDQKKGSESESIVLLEKNSGIKEGVVVPETGIDRLLYSQFEPAELLSHVNRIARIIDSGSSIMELEILKARLSAYYLSKGHKLPDFMDTQLVPGVGDSLMDETVAVENSKSTVEAPTQGPFDELGHSPGLSGSISNHVRKQKSIAEIMREDKDVHTASRGVEAIGSNGGKKRKGGEDGMASKPVQKKKELLLVDTDEDVSSAEHSAKENSGSIGSWLRSKEKKEVLDEGKSEERSRKGSLSRERKKSKYLSPPFTTPIRGQREESMEAESFTVSRKVKASQTSAVAAVLQYPPVYMGRFFDSSNYQTEEDDGKMVIDPEKIQAPVEEVLFQVRNAAISPQIRREGTSLDQFVDFTFVFRSSLYSEGSLLDVYEKNEPGRKRKKPESEEDGVLKEAHIPSVKQKSGTKKKRKETASGKKGADENAEGAVLVVSFCPGTSMPSRSDLISVYSKFGALNEAETDMLYNDYTARVSFLRSFEAENAFNHSKSNNPFGSSDVTFQLEYGQDGERSKNTPLLAATPPSVSLSQGGEASRLIFIQKKLQGLTLILEASGDKSPDLMAKLQSEVKALLEDVNQMVEASLF 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00076 1262 MobiDBLite consensus disorder prediction 1055 1101 - -
Vian8g00076 1262 Coils Coil 1239 1259 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 1055 1076 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 358 383 - -
Vian8g00076 1262 SUPERFAMILY Tudor/PWWP/MBT 578 679 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 400 419 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 270 287 - -
Vian8g00076 1262 ProSiteProfiles PWWP domain profile. 583 644 IPR000313 -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 396 419 - -
Vian8g00076 1262 SMART PWWP_4 581 642 IPR000313 -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 6 24 - -
Vian8g00076 1262 Gene3D - 572 676 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 849 884 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 1 45 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 270 293 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 786 818 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 358 372 - -
Vian8g00076 1262 Pfam PWWP domain 584 666 IPR000313 -
Vian8g00076 1262 PANTHER ALDOLASE-RELATED 257 1212 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 830 946 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 150 173 - -
Vian8g00076 1262 MobiDBLite consensus disorder prediction 897 929 - -
Vian8g00076 1262 CDD PWWP 584 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00076 Vian-Chr8 1058398 1062186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00076 - - pvu:PHAVU_004G012100g 1847.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00076 8 1058398 1062186 Vian8g00076 8 1058398 1062186 ECH