Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00036 ATGGTGAGCGCTTCAGTAGCTCGCAACATCGTCGGCATCATAGGAAATATCATCTCCTTCGGCTTGTTCTTCTCACCAGCCCCAACTTTCTATAAAATTATAAAGCAGAAGTCGGTGGAGGAGTTTAAGCCTGATCCCTACATCGCTACGGTATTGAACTGTGCGTTTTGGGTGTTCTATGGAATGCCATTTGTGCACCCAAACAGTCTTTTAGTGGTGACCATCAATTGCGTTGGACTTGTTTTCGAGTTCGTCTATCTTGCCATATTTTTCATCTATGCAACCAATAAAGGACGGAAAAAGGTGTCGATTTTACTTCTGATCGAGGCTATTTTCTTCGCTGCAATCATTCTTATAACAATGCTGGTACTGCATGGCACTACACGAAGATCGTTGATTGTTGGTATCATCTGCGATGTCTTCAACGTGATGATGTATGTCTCTCCTCTTACAATCATGGCTAAGGTTATCAAAACGAAGAGCGTGAAATACATGCCATTCTGGCTCTCTCTGGCGAACTTCCTTAATGGTGTGTGCTGGACCACATATGCTCTTATCCACCCCTTCGACATCTATGTTCTGATCAGTAACAGCATTGGCGCAGTCTCAGGACTGGTTCAGCTCATCTTGTATGCTTTCTACTTCTGCAGAGGAGAAAACAATGATGATGGTGATCAGCACAACTCAACTGAGGTTCAACTCTCCGAACGCCCTCGAGATGTTGAAGCTTGA 732 0.4413 MVSASVARNIVGIIGNIISFGLFFSPAPTFYKIIKQKSVEEFKPDPYIATVLNCAFWVFYGMPFVHPNSLLVVTINCVGLVFEFVYLAIFFIYATNKGRKKVSILLLIEAIFFAAIILITMLVLHGTTRRSLIVGIICDVFNVMMYVSPLTIMAKVIKTKSVKYMPFWLSLANFLNGVCWTTYALIHPFDIYVLISNSIGAVSGLVQLILYAFYFCRGENNDDGDQHNSTEVQLSERPRDVEA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00036 243 Gene3D - 6 99 - -
Vian8g00036 243 Gene3D - 129 215 - -
Vian8g00036 243 FunFam Bidirectional sugar transporter SWEET 9 99 - -
Vian8g00036 243 FunFam Bidirectional sugar transporter SWEET 130 224 - -
Vian8g00036 243 Pfam Sugar efflux transporter for intercellular exchange 133 214 IPR004316 GO:0016020
Vian8g00036 243 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016020
Vian8g00036 243 PANTHER RAG1-ACTIVATING PROTEIN 1 13 223 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00036 Vian-Chr8 520751 522336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00036 1 199 Miscellaneous Gene Families AT5G62850 60.302 5.53e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00036 K15382 - gmx:100791284 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00036 8 520751 522336 Vian8g00036 8 520751 522336 ECH