Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02047 ATGTCTAAAGATTTGGTAGGAGTCCGATTCCCGATCCTGGGGCTCCAAAGCTACTGGTTTGATGAGGCCCTTGATGACGATGACAGGTTCGGCGGGGGGTTTGGGCTCGGGCCGAGAGGAGCTGCTGCTGGTGACCAAGGTTTGGGTGTTCTTCTGAAGCTCGCGAAGGGTTTTTTTTGTCGGAAGAGGGTTTCGTGGAATGTTGAGGTTTTGCGGATCGTGAACGAGGGTTTCGTTATCTTCGTCGTCGGCGAAGCTAAGGAGTTTGGGGACTTGAGGCTTCTTGGGTTTGGCGGAAGAATGGGGTCTGGACGAGAGGGTGGAGATCTCCTTTCACGGTACCCTTCTCACTCTTCCTCTTCTTCTCTCTCGCTCAAATCTCCTTCTCACAGTTCCTCTTCTTCTTCTCTCCGTTGCTTTGCCACCACTCCGCCGCTCCGCCTCTCCGTCACCACCACTCCGTTGCTCTGCCGTCGCCACGTCTCCTTCAACGCCTCCGAAAGCCATGGCTGCCTCCCACCCCGCAACCCCAACCCCACCACCAATCGCCACCCAACCAGACGCGATCTCACTCCACCAGCGGACGCGGCGGAGGTGAGGGCAACGGGAAACAATGTCATACCGCCTGGTGGGTTGGCGGCTATGGCTCAATCGGCAGCAGGGTTTCATGAAGCTAGCTTGTATGAATTTGACAGTTCTGACTTAATGCATCTGAGTCTTTTAGAGGGTTCCTTGGAGAAAGAAGATGTTGGAGAGTTTGGTGAAATAATTCTTAAAGCAGATTGTGTTGCATTGGGCTCATCTATGAAAATGAGACACTGGTTTAGAATATGCCGAAGATATTCAGGGAATGACACTTTGAAACACTCTCTTCTCTTATCACGTGATTCTTCTTCTGGTATGGATAGTGCTGCAGGTCAAATTCTCTATCCTTTGCACCGTTGCAAAACTGTTCATCTGGTTAGACATGCTCAGGGAGTTCATAATGTTGCAGGAGAGAAGAACCATGATGAATACATGTCTTACGATTATTTTGATGCACACCTAACCCCTCTCGGTTGGAACCAGGTTGAAAATCTGCAAAAACATGTGAAGGCAACAGGACTTTCGAAAACTGTCGAACTTGTTGTGGTTTCCCCATTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTTGGTGGTGAAGTATACACTGATGGGATTAGTGAACAACCTCTTATGATGGAAAATGTCGGACACAGTGATCATCTTGCAGTTTCTAGTCTGAACTGCCCTCCATTTATAGCGGTGGAGCTTTGCCGAGAGCAAATAGGACTTCATCCTTGTGATAAGAGAAGAACCATCAGCGAGTACCGGAATATGTTTCCAGCAATTGATTTTTCACTTATTGAGAGTGAGGAAGACATTTTGTGGAAACCTGACGTCAGAGAGAAGGTAGAAGCAGTTTCTGCTAGGGGCCTGAAGTTTTTGGAATGGTAA 1479 0.4868 MSKDLVGVRFPILGLQSYWFDEALDDDDRFGGGFGLGPRGAAAGDQGLGVLLKLAKGFFCRKRVSWNVEVLRIVNEGFVIFVVGEAKEFGDLRLLGFGGRMGSGREGGDLLSRYPSHSSSSSLSLKSPSHSSSSSSLRCFATTPPLRLSVTTTPLLCRRHVSFNASESHGCLPPRNPNPTTNRHPTRRDLTPPADAAEVRATGNNVIPPGGLAAMAQSAAGFHEASLYEFDSSDLMHLSLLEGSLEKEDVGEFGEIILKADCVALGSSMKMRHWFRICRRYSGNDTLKHSLLLSRDSSSGMDSAAGQILYPLHRCKTVHLVRHAQGVHNVAGEKNHDEYMSYDYFDAHLTPLGWNQVENLQKHVKATGLSKTVELVVVSPLLRTMQTAVGVFGGEVYTDGISEQPLMMENVGHSDHLAVSSLNCPPFIAVELCREQIGLHPCDKRRTISEYRNMFPAIDFSLIESEEDILWKPDVREKVEAVSARGLKFLEW 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02047 492 MobiDBLite consensus disorder prediction 166 191 - -
Vian7g02047 492 CDD HP_PGM_like 317 388 IPR013078 -
Vian7g02047 492 MobiDBLite consensus disorder prediction 113 136 - -
Vian7g02047 492 MobiDBLite consensus disorder prediction 108 136 - -
Vian7g02047 492 SMART PGAM_5 317 420 IPR013078 -
Vian7g02047 492 MobiDBLite consensus disorder prediction 169 187 - -
Vian7g02047 492 Pfam Seed maturation protein 196 220 IPR007011 -
Vian7g02047 492 SUPERFAMILY Phosphoglycerate mutase-like 316 492 IPR029033 -
Vian7g02047 492 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 312 492 - -
Vian7g02047 492 Gene3D - 312 492 IPR029033 -
Vian7g02047 492 Pfam Histidine phosphatase superfamily (branch 1) 319 390 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02047 Vian-Chr7 34370411 34380299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02047 - - gmx:100817808 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02047 7 34370411 34380299 Vian7g02047 7 34370411 34380299 ECH