Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02040 ATGGGAACCGCTTGGAGAAGAGCCTTTTGCACTAGCGACCCAGAATCCACACTACACTCCAAACGCGCCACCCAAAGCTCCTCTCCTTCTCCTGGAACCTGCGCCAGATTCAGCTTCCTCTCCTCGCCGTCACTGCACCACCACCCTCCTTCTTCTCCCCTCTCCCTCTTCAAAAACACCTTCAAATTCAGAAGTAATTGCGGAATCTGTTCGAATAGCGTGAAGACGGGACAGGGAACTGCCATTTACACTGCTGAGTGCGGTCACGCGTTTCATTTTCCTTGCGTAGTTTCCCATGCACGCTCCCACGTCTGCCCCGTCTGTCATGCCACGTGGAACGACGTCCCGCTCCACCAAAACGACGCCGTCCTTCGCACCGTTCAAACCCCAAACCAGAAACCACTCGCTCCTCCTTTCTCCCAATCGGTAGCTTCCTACGACGACGACGAGCCTCTACCAACTTCTCTCACGTGCTCCACGCAAATCGTTCCAATTCCTGAAGCGGATGAAAGCTCGCACGAGGATGAGGATGAAAACGACGATGTATCAGTCTTCCCTGGCTTTTCCGTCCATCCATATCCTCAATCCTCGTTGCGACACAACGCTGAGTCGAAAACTGTTCGAGTCAAGCTCATGCACGAGTGCGCCATTATATCAGTTTCCCCAAACTTTGAAACTCGTGCTTTGGTTTTACGAGTCAAGGCTCCGGCGCCGTCGCCGCCGCTGCGGAGACGGCAGGCGATGGATCTGGTGGCGGTGCTTGACGTTGGCAACGGTATGAGCGGCGCGAAGCTTAACGTGTTAAAGCGCGTGATGCGACTGGTGGTATCCTCTGTCGGGGATGCTGACCGGCTTGCCGTCGTGGCTTCGTCGGCTGATTCGAAGCGGTTGTTACCTCTTCGCAGAATGACGGCTCAGGGACAACGCACGGCTCGGCGCGTGGTGGACGGGGTCGTGTGTGGCCAAGGATCCGGTGTTGGTGAAGAAGCGATCAAGAAAGCGGGGAAAATTCTCGAAGATCGCAGGGAGAGAAATCCTCTAGCGAGGATTTTAATTCTATCCAACGGTGATCACAACAGCATGAGCAATAATCAACGGAGAAGCTTGAGCTACGTGTCCTCTATCGGGTTCGATTGTGTTGAAGTTCCGGTTCACTCGTTTGGGTTCGACATAAAAACGACCGGTTTAACAACCGAACCGTTTGAGGATGATTTTACCCAATACATTAACAGAACATTAAGCGTGGCGGTGCAGGATTTAAGAATTCGGCTTGGCTTCTCTGCGCCGGCTGAAATTCGAGCCGTTTATTCATGCAGCGGGGGACCCACCGCGCTAAACGTAAACTCGGCTAGGCTTGGTGATTTATACGGCGAAGAAGAGAAGGAGTTGTTGGTGGAGGTCAGGGTGCCAACGTCATCATTGGGGAACCACCACGTGTTGACAGTGCAGTGTTTCAACAAAGACCCAGCATCTCAAAAATTCGTGTACAGTGCAGAACACCCATTTACGGTGGTGCCGCCCAAGAATTCTTTTCCCTGCGGCGGCAGGCTTGAGCGGTTGAGGAATGTGTTTATAACCAGCCGAGCCGTAGCCGAGTCAAGAAGGATGGCGAAACACAAAGAGTTTTTGAGCGCTCATCATTTGCTTGCTTCGGCTCGTGCGCTTCTAGTGCAGTTCAGCTCTGCCGAGGAGTACGTGCACAGCTTGGACGCTGAGCTTGCAGAGCTTCAGAGGAGAAGACAGCACCGGGAGACGGTGGGGACGGGGCGGAGTGGAGAGAGCGAGAGAGAGGTAAGGTTGGTGGATGACGGAGGCGAAGTGTTGACGCCGACATCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAAATGGCTAGGATGAAGAAATCGTTGAATAAAGTTGGCGACTTGCACGGCTTCGAAAATGCTAGGTTTTAA 1935 0.5349 MGTAWRRAFCTSDPESTLHSKRATQSSSPSPGTCARFSFLSSPSLHHHPPSSPLSLFKNTFKFRSNCGICSNSVKTGQGTAIYTAECGHAFHFPCVVSHARSHVCPVCHATWNDVPLHQNDAVLRTVQTPNQKPLAPPFSQSVASYDDDEPLPTSLTCSTQIVPIPEADESSHEDEDENDDVSVFPGFSVHPYPQSSLRHNAESKTVRVKLMHECAIISVSPNFETRALVLRVKAPAPSPPLRRRQAMDLVAVLDVGNGMSGAKLNVLKRVMRLVVSSVGDADRLAVVASSADSKRLLPLRRMTAQGQRTARRVVDGVVCGQGSGVGEEAIKKAGKILEDRRERNPLARILILSNGDHNSMSNNQRRSLSYVSSIGFDCVEVPVHSFGFDIKTTGLTTEPFEDDFTQYINRTLSVAVQDLRIRLGFSAPAEIRAVYSCSGGPTALNVNSARLGDLYGEEEKELLVEVRVPTSSLGNHHVLTVQCFNKDPASQKFVYSAEHPFTVVPPKNSFPCGGRLERLRNVFITSRAVAESRRMAKHKEFLSAHHLLASARALLVQFSSAEEYVHSLDAELAELQRRRQHRETVGTGRSGESEREVRLVDDGGEVLTPTSAWRAAEKLAKMARMKKSLNKVGDLHGFENARF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02040 644 Gene3D von Willebrand factor, type A domain 248 403 IPR036465 -
Vian7g02040 644 SMART ring_2 67 108 IPR001841 -
Vian7g02040 644 Pfam RING-like zinc finger 66 96 IPR001841 -
Vian7g02040 644 ProSiteProfiles Zinc finger RING-type profile. 67 109 IPR001841 -
Vian7g02040 644 Pfam von Willebrand factor type A domain 249 362 IPR002035 -
Vian7g02040 644 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 65 639 - -
Vian7g02040 644 Coils Coil 559 579 - -
Vian7g02040 644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 136 IPR013083 -
Vian7g02040 644 SUPERFAMILY RING/U-box 66 123 - -
Vian7g02040 644 SMART VWA_4 247 413 IPR002035 -
Vian7g02040 644 SUPERFAMILY vWA-like 235 362 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02040 Vian-Chr7 33776733 33778773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02040 - - gmx:100795015 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02040 7 33776733 33778773 Vian7g02040 7 33776733 33778773 ECH